Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g0332 | ATGTCTAACACTGACGGAACCACTAACGGCGTTACCAACATTGACCCACAGCGCCACCAGCAACAGCAGCAGCAGCAGAGCGCTGCCGGAAACGGCGCCCTCGCCGTTAAGAAACCGCCATCCAAGGACCGTCACAGCAAGGTGGACGGCCGCGGCCGCCGCATACGCATGCCGATCATCTGCGCCGCACGTGTCTTTCAGCTCACGCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCTTCCATCATCGCAGCCACCGGCACCGGCACCACCCCCGCCAGCTTCTCCTCCGTCTCGGTATCAGTCCGCGGCGGCGCAGCCAACTCCCTCTCCTCCCCTTCCTCCACCTCTGCCGCATCATCCCTCGACCACAAGCCCCTTCTCGCTCCCACTCCCTTCATCCTCGGCAAGCGCATACGCACCGACGACGACGCGTCCGCCAAAGACGATGGCGTCACCGTGGGGCCCGCCGTGGGGTCGTTGGTGGGCCCTGCGGCCCCAGGGGGCCTCTGGGCCCTCCAGGCCAGACCCGATTTCGGACAAATTTGGAGCTTCGCGGCGGCGGCGGCAGCTGCGGCGCCTCCGCCGGAGATGGTAGTTCAGCCGGCGGTGTCGGTGTCTCAGCAGCAGCAGGCGTCGTTGTTCGTTCACCATCAGCACCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGGCATCTGAATTTGCTGGCCTCTTTGTCCGGAGGACCCGGAAATTCCGGTCGGAGAGACGATGAGCCTCGCTGA | 834 | 0.6511 | MSNTDGTTNGVTNIDPQRHQQQQQQQSAAGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAANSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVTVGPAVGSLVGPAAPGGLWALQARPDFGQIWSFAAAAAAAAPPPEMVVQPAVSVSQQQQASLFVHHQHHQHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR* | 278 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g0332 | 277 | MobiDBLite | consensus disorder prediction | 38 | 53 | - | - | |
Dod06g0332 | 277 | ProSiteProfiles | TCP domain profile. | 41 | 95 | IPR017887 | - | |
Dod06g0332 | 277 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Dod06g0332 | 277 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Dod06g0332 | 277 | Pfam | TCP family transcription factor | 41 | 208 | IPR017887 | - | |
Dod06g0332 | 277 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 1 | 274 | IPR005333 | GO:0003700 | |
Dod06g0332 | 277 | PANTHER | TRANSCRIPTION FACTOR TCP FAMILY-RELATED | 1 | 274 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g0332 | Dod-Chr6 | 4594422 | 4597329 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g0332 | 31 | 277 | TCP Transcription Factor Family | AT5G23280 | 63.813 | 1.78e-92 | 272 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Dod06g0332 | TCP | 1.3e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g0332 | K16221 | - | cpap:110813909 | 358.221 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod06g0332 | 06 | 4594422 | 4597329 | Dod06g0332 | 06 | 4594422 | 4597329 | ECH |