Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0332 ATGTCTAACACTGACGGAACCACTAACGGCGTTACCAACATTGACCCACAGCGCCACCAGCAACAGCAGCAGCAGCAGAGCGCTGCCGGAAACGGCGCCCTCGCCGTTAAGAAACCGCCATCCAAGGACCGTCACAGCAAGGTGGACGGCCGCGGCCGCCGCATACGCATGCCGATCATCTGCGCCGCACGTGTCTTTCAGCTCACGCGCGAGCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCTTCCATCATCGCAGCCACCGGCACCGGCACCACCCCCGCCAGCTTCTCCTCCGTCTCGGTATCAGTCCGCGGCGGCGCAGCCAACTCCCTCTCCTCCCCTTCCTCCACCTCTGCCGCATCATCCCTCGACCACAAGCCCCTTCTCGCTCCCACTCCCTTCATCCTCGGCAAGCGCATACGCACCGACGACGACGCGTCCGCCAAAGACGATGGCGTCACCGTGGGGCCCGCCGTGGGGTCGTTGGTGGGCCCTGCGGCCCCAGGGGGCCTCTGGGCCCTCCAGGCCAGACCCGATTTCGGACAAATTTGGAGCTTCGCGGCGGCGGCGGCAGCTGCGGCGCCTCCGCCGGAGATGGTAGTTCAGCCGGCGGTGTCGGTGTCTCAGCAGCAGCAGGCGTCGTTGTTCGTTCACCATCAGCACCATCAGCATCAGCAGCAGCAACAAGCCATGGGAGAAGCTTCGGCGGCGAGGCTGGGAAATTACCTTCCTGGGCATCTGAATTTGCTGGCCTCTTTGTCCGGAGGACCCGGAAATTCCGGTCGGAGAGACGATGAGCCTCGCTGA 834 0.6511 MSNTDGTTNGVTNIDPQRHQQQQQQQSAAGNGALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSVSVRGGAANSLSSPSSTSAASSLDHKPLLAPTPFILGKRIRTDDDASAKDDGVTVGPAVGSLVGPAAPGGLWALQARPDFGQIWSFAAAAAAAAPPPEMVVQPAVSVSQQQQASLFVHHQHHQHQQQQQAMGEASAARLGNYLPGHLNLLASLSGGPGNSGRRDDEPR* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0332 277 MobiDBLite consensus disorder prediction 38 53 - -
Dod06g0332 277 ProSiteProfiles TCP domain profile. 41 95 IPR017887 -
Dod06g0332 277 MobiDBLite consensus disorder prediction 1 31 - -
Dod06g0332 277 MobiDBLite consensus disorder prediction 1 53 - -
Dod06g0332 277 Pfam TCP family transcription factor 41 208 IPR017887 -
Dod06g0332 277 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 274 IPR005333 GO:0003700
Dod06g0332 277 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0332 Dod-Chr6 4594422 4597329 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0332 31 277 TCP Transcription Factor Family AT5G23280 63.813 1.78e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod06g0332 TCP 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0332 K16221 - cpap:110813909 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0332 06 4594422 4597329 Dod06g0332 06 4594422 4597329 ECH