Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0322 ATGGACGAACCCGTTCCTCTGAATGCAAACGCCATTCCTCACAAAAAAGAGGGCAATGACGCCGGGGAGCACCCCACAAACGCGATTGCCGAGGAGCACGTCAATGACGGTGCGGAAGTTGTGGAATCCGCTGAAAAGGAAGAACCTTTGAACAGTGGCGGGGTGTTGGAGAGCAAAGGCGGTGGAGAAGTTGCTGTGAGAAAGAAGCGCGGCAGAAAGAGCAAGGAGGAGATGGAGGCGATGAGGAAGATGGAGAACACATTGGGTGATGATGCTGCTGCTGCTGCTACTGCTAGGAACATGGAAACGCGTGGTAGCAGAACAAGAACGAGGGTACAGAGTTATGCTGAGATTGAGAACGAGGTGGATGATGAGGAAGAGGAGGTTCTTGATGTGAATGAGTTCAAACGTGACATAGATCATAACAAAGAGGAAAATGGTGGTGTGCAGGAGAAGAAGAAGAAACGTGGTAGGAAAAAGAAGGTCCCGGAGAAGAATGATGAAGATCGTGGTGATGCCAATGCTAAAGATCAAGTCTTGGGGGCTCGTGTTGATTATGTCAACAGAGGGGAAGGTGGAACTGTAAATGTTGGTGTTGCGAAGCGGAAGCCTGGTAGACCAAGGTTGAACGGGGGGAAGGGTAGACCTGGTAGAAAGAGGAAGACCCTGAATGAAGAGAAGGGTGGTGATGCAATTGCAGAAAATCAAGTCTCTGAGGCTCATGCTGACACTGACCATAACAACGGGGAAGGTGCAAAAGATGGTCCTTTGAAGCGGAAACGTGGCAGGAATTGGGGGACCCTGACCAAAGAAGAAGAGTGTAGTGATGGAAACGCAGACAATGAAGATGAGATCACCAAAGATTCTTCAGAGAAAAGCAGCATCCACCAGTGTTATGGTTTAAGGGGCCGTAGAGTCAACGTGCAACCGGAAGAGCCAAAAATCAATAAGCATCACCCTAAATGGATTGCAGAGGAGTCCTTAATGTGCCATCAGTGTCAGAGAAATGATAAAGGTGATGTTGTGAGGTGCACTGCATGTAATCGGAAAAGATTTTGCGTGCCCTGCTTGAAGAATTGGTATCCTCAGTTGAAGCCGGAGGATATTGCAAAGGCATGTCCTGTGTGCACTGGTAATTGCAATTGCAAAGCATGCTTGCGATCTGGTAAACTTATCAAAAAAATGAAAGGAAACAAAGGGGAAATCAATGAACAAGAAAGAGTTGAGCTTTCGAAATATTTGCTGCAAGGTCTTCTTCCATATCTAAGACAGTTGGACAAAGAACAAATGGTTGAGAAGGAGTTAGAAGCTAAGAAATTAGGGCTCTCACTCTTGGAGCTAGATATTGAAGAGGCAGAATATGATAAAGATGAACGTGTCTACTGTGACAACTGCAAAACGTCGATATTTGATTACCACAGAAGCTGTAGCAAATGCTCTTTTGACCTTTGTCTCATTTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTCTAGGTGGTGCAGAACCAGTTGACTTGGAGTTTGTCAACCGGGGCATTGGTTATCTGCATGGCGTAGAAGAAGATAATAAGAGGGGAAAACGTAATGCGTCACAGGCTGATGCTAAGCCTGAGATTCGTGAATGGTCACGATCTGGGTGGCATGCTGAGAGTGACGGCAGCATTCCCTGCCCAAAAGTTGATGATGAGTGCCGTGACAGTTTTCTTGAACTGAAAACTGTACTTGGGTCAAATTTTGTCTCAGAGCTGGTATATAAAGCAGAAGAACTAGCAGAAGCATATAAGGTCCATGATTCCGTTGAGATTCCTGACAGCTGGTGTTCATGTTTGAAGTTCAGTAGAAGCACAGATGATAGAAGTAATAATACAAGGAAGGCTGCTTCCCGTGATGATTCCAGTGACAACTATTTATACTGTCCTTCAGCTGCAGATCTACAACTCGATGATTTAAAGCATTTTCAATGGCATTGGAACAAAGGGGAGCCTGTCATTGTCAGCAATGTGCTTGAGTGCACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTCCGTCAAATAACTAACAGTAAGAATGATCAACATTTGGATGTGAAGGCAATTGATTGCTTGGATTGGTGTGAGGGAGAGATTAATATCCACCAATTTTTTACTGGGTATTCAAATGGTCGTCAGGATTGGCTTAATTGGCCTCAGATACTGAAATTAAAAGATTGGCCTCCTTCTAATTTGTTTGAGGAACGTTTACCTCGTCACTGTGCCGAGTTCATATCTTCCTTGCCCTATAAGCAATATACAGATCCTCTTAATGGTGCTCTTAATCTTGCTGTGAGGTTGCCTCAGGATTGTCTAAAGCCAGACATGGGACCAAAGACATATATTGCCTATGGATTTTCTCAGGAGCTTGGCCGTGGTGATTCTGTGACTAAGCTTCACTGTGATATGTCTGATGCAATAAATGTGTTAACTCATATTGCTGAAGTGAAATTGGGGCCTGATGTTCTTAAAACCATTGAGGATTTGAAGCTACGGCACTTTCAGCAAGACCAAAGGGAGCTACTTGGAGATGGGGAAGAAAATATTGTTGACATGCTGAATGTTTCATCTGGTACGACAAATACTTCAGACGTCCAAAATGGTTTTCAAGTTGTGGAAAATGAAAGTGGATTATATGATGCGGAAGTGGTTGAGCAATTTCATCAGCCTTCTGGTAGTAATATGGATGGTCTTTCTTATGGGTTAGAGTCAAAAGAGGTTGAAAAGGTAAAAATTGAAGTTCAGGGGGATGCTTCTGATGGTGCTCTCTGGGATATTTTTCGGAGACAAGATACTCCTAAATTGCAGGAATATCTGAAAAAGCATTTTAGAGAGTTTAGACATGTCTATTGCAGCCCTTTAAAGCAGGTTATTCACCCCATCCATGATCAGACCATGTATCTGACTGTAGAGCATAAGAAAAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGTTGGGAGAAGCTGTTTTTATTCCAGCGGGTTGTCCTCATCAAGTCAGAAACCTTAAGTTCTGA 3072 0.4411 MDEPVPLNANAIPHKKEGNDAGEHPTNAIAEEHVNDGAEVVESAEKEEPLNSGGVLESKGGGEVAVRKKRGRKSKEEMEAMRKMENTLGDDAAAAATARNMETRGSRTRTRVQSYAEIENEVDDEEEEVLDVNEFKRDIDHNKEENGGVQEKKKKRGRKKKVPEKNDEDRGDANAKDQVLGARVDYVNRGEGGTVNVGVAKRKPGRPRLNGGKGRPGRKRKTLNEEKGGDAIAENQVSEAHADTDHNNGEGAKDGPLKRKRGRNWGTLTKEEECSDGNADNEDEITKDSSEKSSIHQCYGLRGRRVNVQPEEPKINKHHPKWIAEESLMCHQCQRNDKGDVVRCTACNRKRFCVPCLKNWYPQLKPEDIAKACPVCTGNCNCKACLRSGKLIKKMKGNKGEINEQERVELSKYLLQGLLPYLRQLDKEQMVEKELEAKKLGLSLLELDIEEAEYDKDERVYCDNCKTSIFDYHRSCSKCSFDLCLICCRELRSGQLLGGAEPVDLEFVNRGIGYLHGVEEDNKRGKRNASQADAKPEIREWSRSGWHAESDGSIPCPKVDDECRDSFLELKTVLGSNFVSELVYKAEELAEAYKVHDSVEIPDSWCSCLKFSRSTDDRSNNTRKAASRDDSSDNYLYCPSAADLQLDDLKHFQWHWNKGEPVIVSNVLECTSGLSWEPLVMWRAFRQITNSKNDQHLDVKAIDCLDWCEGEINIHQFFTGYSNGRQDWLNWPQILKLKDWPPSNLFEERLPRHCAEFISSLPYKQYTDPLNGALNLAVRLPQDCLKPDMGPKTYIAYGFSQELGRGDSVTKLHCDMSDAINVLTHIAEVKLGPDVLKTIEDLKLRHFQQDQRELLGDGEENIVDMLNVSSGTTNTSDVQNGFQVVENESGLYDAEVVEQFHQPSGSNMDGLSYGLESKEVEKVKIEVQGDASDGALWDIFRRQDTPKLQEYLKKHFREFRHVYCSPLKQVIHPIHDQTMYLTVEHKKKLKEEYGIEPWTFIQKLGEAVFIPAGCPHQVRNLKF* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0322 1023 MobiDBLite consensus disorder prediction 101 115 - -
Dod06g0322 1023 PANTHER - 33 1022 - -
Dod06g0322 1023 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 33 1022 IPR045109 GO:0032454|GO:0033169
Dod06g0322 1023 SMART cupin_9 750 1022 IPR003347 -
Dod06g0322 1023 Coils Coil 115 135 - -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 161 176 - -
Dod06g0322 1023 Gene3D Cupin 636 1023 - -
Dod06g0322 1023 ProSiteProfiles Zinc finger RING-type profile. 330 377 IPR001841 -
Dod06g0322 1023 ProSiteProfiles JmjC domain profile. 769 1023 IPR003347 -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 40 291 - -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 1 27 - -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 62 86 - -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 132 152 - -
Dod06g0322 1023 Pfam JmjC domain, hydroxylase 923 1023 IPR003347 -
Dod06g0322 1023 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 325 390 IPR018866 -
Dod06g0322 1023 MobiDBLite consensus disorder prediction 239 291 - -
Dod06g0322 1023 SUPERFAMILY Clavaminate synthase-like 648 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0322 Dod-Chr6 4536410 4544449 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Dod06g0322 JmjC 7.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0322 K15601 - gmx:112997634 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0322 06 4536410 4544449 Dod06g0322 06 4536410 4544449 ECH