Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0320 ATGGTGATGTTGGCGATGCACGATGACGAGAGCTGCGGCAGCGCCACCGCCACTACCTCCGGAGCTTCCACCGCCGCCGCTCCTCCGTCCTCCTCTCCGGTACAGAGCCGCCAGCACCGGCAGAAGGTCGAAGTCTATAATGAGGTACTTCGCCGCCTCAACGATTCCCGCGTCGCCGAGGCTACGCAACCCGGCTTCGACGATCAGCTCTGGGCTCACTTCAACCGCCTCCCCGCACGGTATGCGCTGGATGTGAATGTGGAAAGGGCTGCGGATGTTCTTATGCACAAGAGATTGTTGCATTTGGCGCATGATCCTGCTAATAGGCCTGCAATTGAAGTTCGCTTAGTCCAGGTTCATCCCATATCTGATGGAAATTCAGCTGACTGGACAGATGTTCCTGAGGATGAATCAGGTCAAAGCTCTTCAAAATATTCAAGCAGACAGAGTATGCATCCACCTCCTGCTTTTGGTTCTTCTCCTAATCTTGAAGCACTGGCACTTGAAGCAAATAATTCTGCTGAAATGGAGGAGGAACACTCTGTACATGCCAGTGCTCAATATTCACGGCCCATGCATGAAATCACCTTCTCAACAGATGACAAGCCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCCCATGCCTTTTCTACAACTGATGGTTACTCATTAGATGTGTTTGTTGTTGACGGATGGCCGTATGAGGAAACAGAGAAGCTTAAAGAGGCCTTGGAAAAAGAAGTCTTGAAGATTGAGTGGAGGGCAAGGTCCGGTCAGCAATCAGTTTCTTCTGCTGGCGAACATGATGAAGCAGTGATTAAATATGAACCTGATCATTTGTCAATACCTAACGACGGGATAGATGTTTGGGAGATAGATCCTAAACATTTAAAATTTGGAACTCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTATCTATTGTAGCCAGGAAGTAGCCATTAAAGTTCTCAAGCCTGAGCATGTAAATTCAGATTTGCAGAGAGAGTTTGCACAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAGTTCATAGGGGCATGTACCAAACCCCCAAGCTTATGCATAGTAACAGAATTTATGTCTGGTGGAAGTGTCTACGACTACTTACATAAGCAGAAGGGCATTTTTAAATTTCCCACCCTGCTCAAAGTTGCAATTGACATTGCTAAAGGAATGAACTACTTGCACCAGCACAACATAATCCATAGAGACTTGAAGGCTGCCAATCTTTTGATGGATGAAAATTGTATTGTAAAGGTTGCTGATTTTGGGGTTGCTAGAGTCAAAGCTCAATCGGGAGTTATGACAGCGGAAACTGGAACATATCGGTGGATGGCTCCCGAGGTTATAGAACACAAGCCGTACGATCACAAGGCTGATGTATTTAGTTTCGGAATTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCGTACGAATATTTGACCCCTCTACAGGCAGCCATAGGAGTAGTTCAAAAGGGTTTACGACCCACCATCCCCAAGAACACACATCCAAAGTTTGTTGAGCTTCTTGAGAGATCTTGGCAGCAAGATCCAACATTGAGACCTAACTTTTCCGAAATCATCGAGATCCTCCAGCCGTTAGCTAAGGAGGTTGGAGATGAAAGAGAGGAGCGGCGCAAGGATAAATCGGGAGGACTACTCTCTGTCCTTAGGCGAGGTCATCACTAA 1764 0.4637 MVMLAMHDDESCGSATATTSGASTAAAPPSSSPVQSRQHRQKVEVYNEVLRRLNDSRVAEATQPGFDDQLWAHFNRLPARYALDVNVERAADVLMHKRLLHLAHDPANRPAIEVRLVQVHPISDGNSADWTDVPEDESGQSSSKYSSRQSMHPPPAFGSSPNLEALALEANNSAEMEEEHSVHASAQYSRPMHEITFSTDDKPKLLSQLTALLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYEETEKLKEALEKEVLKIEWRARSGQQSVSSAGEHDEAVIKYEPDHLSIPNDGIDVWEIDPKHLKFGTQIASGSYGELFKGIYCSQEVAIKVLKPEHVNSDLQREFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGIFKFPTLLKVAIDIAKGMNYLHQHNIIHRDLKAANLLMDENCIVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDPTLRPNFSEIIEILQPLAKEVGDEREERRKDKSGGLLSVLRRGHH* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0320 587 CDD ACT_TyrKc 192 259 - -
Dod06g0320 587 SMART serkin_6 307 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0320 587 Pfam Protein tyrosine and serine/threonine kinase 307 556 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 MobiDBLite consensus disorder prediction 7 41 - -
Dod06g0320 587 MobiDBLite consensus disorder prediction 133 156 - -
Dod06g0320 587 SUPERFAMILY ACT-like 192 263 IPR045865 -
Dod06g0320 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Dod06g0320 587 Gene3D - 192 263 - -
Dod06g0320 587 Gene3D Phosphorylase Kinase; domain 1 296 385 - -
Dod06g0320 587 ProSiteProfiles Protein kinase domain profile. 307 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0320 587 MobiDBLite consensus disorder prediction 12 40 - -
Dod06g0320 587 MobiDBLite consensus disorder prediction 564 580 - -
Dod06g0320 587 Gene3D Transferase(Phosphotransferase) domain 1 386 577 - -
Dod06g0320 587 SUPERFAMILY Protein kinase-like (PK-like) 291 556 IPR011009 -
Dod06g0320 587 Coils Coil 244 264 - -
Dod06g0320 587 MobiDBLite consensus disorder prediction 564 587 - -
Dod06g0320 587 ProSiteProfiles ACT domain profile. 194 266 IPR002912 -
Dod06g0320 587 PRINTS Tyrosine kinase catalytic domain signature 418 436 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 PRINTS Tyrosine kinase catalytic domain signature 381 394 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 PRINTS Tyrosine kinase catalytic domain signature 464 474 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 PRINTS Tyrosine kinase catalytic domain signature 527 549 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 PRINTS Tyrosine kinase catalytic domain signature 483 505 IPR001245 GO:0004672|GO:0006468
Dod06g0320 587 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 30 570 - -
Dod06g0320 587 MobiDBLite consensus disorder prediction 124 161 - -
Dod06g0320 587 CDD STKc_MAP3K-like 313 556 - -
Dod06g0320 587 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0320 Dod-Chr6 4501281 4508525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0320 9 586 MAP Kinase Kinase Kinase AT4G35780 65.862 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Dod06g0320 PK_Tyr_Ser-Thr 5.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0320 - - gmx:100805180 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0320 06 4501281 4508525 Dod06g0320 06 4501281 4508525 ECH