Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0319 ATGCAATCTATACGGAAATCATTCAAATCCTATGCTTCATACAATAAACATTCAAGGTTTTCCGCATCTGGAGACCCTGATTCTAACCACGAACACTTACCTATTCTCCACGACCAAGAAACCACTCACCACCACCACCCCTACCCTCCTCCGCCGCCTTCCATGGCCGCAGGAGATTTTGTCGTCAAGATCAATGAAGATGGTGGAAACAAGATTTGGAGGGAGTCCAGCTATGATTTCTGGGGTAGCAGCGACGACGGCGCCGCCGTAGACAATGCCGAGGAGAGCTTCGATTTCCGGCAGACGGGTATGCCGCCGGTGACTGAGGAGGACCCGCCGTCACAGCTGATCGGAAGATTCCTCCACAAACAGAGGGCCTCCGGCGAGATTTCTTTGGACATGGATTTGGAGATGGAGGAGCTGCAGAACTCCGGTGCCGGCCCCAGTGAAAAGAAGCTTCCTCCGGTGGAGGAGTCTCCGACATTGAACAACAACCGAATCTCCAAGGAGCTCAAGGTCTCTTTCGAGGAACCTTCTTCCAATGTGATGGCTGAAACGCCTAACGATTCTGTAAGGAGAAGGCACAGCAGGGACTCGCCGTCGATCGGAGAGTTTCAACGGCCGCCGCATCCGTCGCACCAGGATCGCCGTGGTTCGCCGTCTCCGGCGAGTAATGGCGGTGGAGATGACGGTGAAGTTGTCAGGTGCACCTCAAACCGTTCGTTTGAGAGGACACTCTCTATGCAGAAAAAATCCGCTTTGTTGAAGACAAAGACCCGGTCTAGGTTGCTGGACCCGCCCGAAGAACCCGATAAGAGATCGGGTCGGGTCCCCAAGTCGGGTCAGTTGTTTTCCGGGTTGTTGGGGAAGAAGGGTGGTGATGATGATGAGGATGATCCGTTTTTGGAAGAGGATCTTCCTGATAAGTATAAGAAGACACATTTCAGCTTATGGATTTTGTTGGAGTGGTTGGTCTTGATCTTGATCATTGGTGCACTTGTGACAACCCTTAGTGTTCCGTTCCTGAGGGAGAAGAATCTATGGCAGCTCAAGCTGTGGAAGTGGGAGGTAATGATTTTGGTTTTGATATGTGGCAGGCTGGTTTCTGATTGGGTGATAAGAATAGCTGTGTTTTGTATTGAGAGGAATTTCCTTTTGAGGAAAAGGGTGCTGTATTTTGTGTATGGTGTGAGGAAGGCTGTTCAGAATTGTGTGTGGTTGGGACTGGTTCTGATTGCTTGGCACTTTTTGTTTGATAAGAGAGTTCAGAGGGAGACTAGGAGTAATTTCCTTGAGTATGTTACTAAGATTTTAGTGTGCTTCTTGGTGGGGACTTTGGTGTGGTTGGTGAAGACTCTTATGGTTAAGGTTCTGGCCTCTTCTTTCCATGTGAGCACATACTTTGATAGGATTCAGGAGTCACTGTTCAATCAGTTTGTGATTGAGACGCTCTCCGGGCCACCTTTGGTGGAGCTTCGGAGGGCTGAGGAAGAGGAAGAAAAGCTTGCTGATGAGGTTGAGAAGCTGCAGAATGCTGGGGTTACCATACCTCCTGACCTTAGGGCAACTGCATTCTCTACTGCTAAGAGTGGGAAGTTGAGGAGTGGGATGCTCCAGAAAAGCCCAAGGGTAGTAAGTGGCAAGTTTTCAAGGCCACTCTCCAAGAAATCCGATGATGGGATAACTATTGATCACTTGCATAAGCTGAATCCGAATAATGTCTCTGCATGGAATATGAAGAGGTTGATCAATATGGTCCGGCACGGGGCTCTGTCTACACTGGATGAACAGATACTTGATTCAACCAATGATGATGAGCATGCCACACAGATTAGAAGTGAAAATGAGGCTAAAGCAGCAGCCAAGAAAATTTTTCAGAATGTTGCTAGGCGCGGTTGCAGACACATACACATGGAAGATTTGATGCGTTTCATGCAAGAAGATGAAGCTGTAAAAACCATGAATCTCTTTGAAGGAGCATCTGAGACCGGGAAGATAAGCAAATCAGCCTTGAAGAACTGGGTGGTCAATGCCTTCAGAGAGAGGAGAGCACTTGCTTTGACGTTGAATGATACCAAAACAGCAGTGAACAAGCTTCATCGAATGCTCAATTTTTTAGTTGCCATTGTCATCCTGGTTATTTGGCTCTTGATATTAGAAATTGCCACTACCAAATTTCTGCTATTTGTGAGCTCCCAGCTTGTCTTGGTTGCATTCATATTTGGAAATACATGCAAGACCATATTTGAAGCAATTGTCTTCTTATTTGTGATGCACCCATTTGATGTGGGAGATAGGTGTGAAATTGATGGGGTCCAGATGGTTGTAGAAGAAATGAATATATTGACAACCATATTTTTGAGATATGATAATCAAAAGATCATGATCCCTAATAGCGTCCTTGCTACTAAGTCCATAAATAATTACTACCGAAGTCCTGACATGGGAGATGCTATTGAATTCCTTATTCATGTATCTACCCCAGTTGAAAAGATTTCTGTCATGAAACACAGGATACAGAGTTACATTGATAACAAGAAGGAGCACTGGTATCCATCACCTTTTATAGTCTTGAAGGATCATGAACAATTAAACATGGTGAGGATAGCGATTTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAGAGATACGTGAGGAGATCCCTCTTGATTGAAGAGATGATCAAGATTTTCCGGGAGCTTGACATTCATTACCGTCTGCAACCAATCGATATTAGCATTAGAAGCATGCCTACCACTTCTGAGCGTCTTCCACCCAGTTGGTCCACAATCACAAGTTGA 2808 0.4605 MQSIRKSFKSYASYNKHSRFSASGDPDSNHEHLPILHDQETTHHHHPYPPPPPSMAAGDFVVKINEDGGNKIWRESSYDFWGSSDDGAAVDNAEESFDFRQTGMPPVTEEDPPSQLIGRFLHKQRASGEISLDMDLEMEELQNSGAGPSEKKLPPVEESPTLNNNRISKELKVSFEEPSSNVMAETPNDSVRRRHSRDSPSIGEFQRPPHPSHQDRRGSPSPASNGGGDDGEVVRCTSNRSFERTLSMQKKSALLKTKTRSRLLDPPEEPDKRSGRVPKSGQLFSGLLGKKGGDDDEDDPFLEEDLPDKYKKTHFSLWILLEWLVLILIIGALVTTLSVPFLREKNLWQLKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETRSNFLEYVTKILVCFLVGTLVWLVKTLMVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVELRRAEEEEEKLADEVEKLQNAGVTIPPDLRATAFSTAKSGKLRSGMLQKSPRVVSGKFSRPLSKKSDDGITIDHLHKLNPNNVSAWNMKRLINMVRHGALSTLDEQILDSTNDDEHATQIRSENEAKAAAKKIFQNVARRGCRHIHMEDLMRFMQEDEAVKTMNLFEGASETGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIVILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTIFEAIVFLFVMHPFDVGDRCEIDGVQMVVEEMNILTTIFLRYDNQKIMIPNSVLATKSINNYYRSPDMGDAIEFLIHVSTPVEKISVMKHRIQSYIDNKKEHWYPSPFIVLKDHEQLNMVRIAIWPTHRMNFQDMGERYVRRSLLIEEMIKIFRELDIHYRLQPIDISIRSMPTTSERLPPSWSTITS* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0319 935 Coils Coil 489 515 - -
Dod06g0319 935 MobiDBLite consensus disorder prediction 261 276 - -
Dod06g0319 935 Pfam Mechanosensitive ion channel 702 906 IPR006685 GO:0016020|GO:0055085
Dod06g0319 935 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2 925 - -
Dod06g0319 935 MobiDBLite consensus disorder prediction 18 57 - -
Dod06g0319 935 MobiDBLite consensus disorder prediction 134 234 - -
Dod06g0319 935 MobiDBLite consensus disorder prediction 256 300 - -
Dod06g0319 935 MobiDBLite consensus disorder prediction 23 45 - -
Dod06g0319 935 SUPERFAMILY Sm-like ribonucleoproteins 750 809 IPR010920 -
Dod06g0319 935 PIRSF Memb_At2g17000 43 935 IPR016688 -
Dod06g0319 935 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 2 925 IPR016688 -
Dod06g0319 935 Gene3D - 760 809 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0319 Dod-Chr6 4486125 4491641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0319 59 935 Mechanosensitive Ion Channel Family AT1G78610 56.678 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0319 K22048 - gmx:102665658 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0319 06 4486125 4491641 Dod06g0319 06 4486125 4491641 ECH