Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0313 ATGGAGATGCATACGGTGGTGATGAGGCTTGTGGGCTCGCAGCAGGTATTGAGACTCGATGACGGTCTCGTGACGATGGTAGCAGATCTGGGTGAGGTGTCTATGAATGCGCCCGTGACTAAGCAGCCTAAAGGTGCACAGTTGACAATCTTTTGCGGTGGGGAAGTCATTGTCTTTGATGATATTCCAGCGGAAAAAGCCAAGGAGATCACGACCTTTGTCGACAAAGGAATTCCCCAAAGCCAGAACAACTATGCTCACAAATTCACTCAGAGCCAGCCTTCATTTGCTTCTCCTAATATGGTGGAAATGAGAACAGCGAGAATGGTAGTGAGGTTTATTCTGTAA 348 0.477 MEMHTVVMRLVGSQQVLRLDDGLVTMVADLGEVSMNAPVTKQPKGAQLTIFCGGEVIVFDDIPAEKAKEITTFVDKGIPQSQNNYAHKFTQSQPSFASPNMVEMRTARMVVRFIL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0313 115 Pfam tify domain 42 70 IPR010399 -
Dod06g0313 115 SMART tify_2 41 76 IPR010399 -
Dod06g0313 115 ProSiteProfiles Tify domain profile. 41 76 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0313 Dod-Chr6 4357255 4358660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0313 22 79 Tify Gene Family AT1G17380 43.103 7.12e-08 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod06g0313 tify 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0313 K13464 - gmx:100801449 77.4109