Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0288 ATGTTATCAGAGTTAATGAACTTTGTGAGGGCCTGCTTTCAGCCGAGTTCGGAAGGGTATCCGCGCGCAGGCTCTGATGCTGGAGGTAGACAGGATGGACTATTGTGGTACAAAGACTCGGGGCAGCACTTGAATGGTGAATTTTCAATGGCTGTAGTCCAAGCCAATAACTTGCTGGAGGATCAGAGCCAGATTGAATCAGGCACTTTGAGCTCCAATGAGTCTGGCCCTTATGGTACCTTTGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCGCGGTTTATCAATAATTATCTGTTTCACCATCTCAAGAGATTTACTTCAGAGCAACAAACAATGTCAGCGGATGTAATTCGCAAGGCATTCCAAGCTACAGAAGAGGGATTTATGTCACTGGTTGCCAGAGAGTGGCCAATGAACCCACAAGTTGCAGCTGTTGGATCATGCTGTCTAGTTGGTGTTATTTGTAACGGAACCCTTTATGTAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGTAGTCAAGGCAACTGGCGAGGTTCTGGCCATGCAATTATCAACAGAACACAATGCGGCATTAGAGTCTATAAGACAGGAGCTGCACTCTTTTCACCCTGATGATTCAAATATAGTTGTTTTAAAGCATAATGTATGGCGTGTGAGGGGCCTTATTCAAGTTTCTAGATCTATTGGTGATGTATATTTGAAAAAGCCTGAGTTCAATAGAGAACCTCTATATGCTAAGTTTCGTCTCCGTGAGCCATTCGAGAGGCCAATTTTGAGCTCAGAGCCGTCAATACATGTGCATCAGTTGCTTCCACAGGATCGATTTATTATATTCGCATCTGATGGCCTCTGGGAGCACCTTAGCAATCAAGAAGCAGTTGATATAGTTCAAAATAATCCCCACAGTGGAAGTGCGAGGAAGCTGGTGAAAGCCGCACTTCAAGAAGCGGCAAAGAAAAGAGAAATGAGATATTCAGACTTGAAGAAGATCGACCGTGGAGTTCGTCGACATTTCCACGATGATATCACTGTGATTGTTGTATATCTTGACTCAAATCTCGTGAGTCGGGCAAGCACAGGCAAGTTTCCTAGTGTTTCCATTAGAGGGGGTGGTGTTAACCTGCCTCATAACACACTGGCTCCTTGTACAACACCAACAGAGGCTGGCGGCAACTGA 1194 0.4539 MLSELMNFVRACFQPSSEGYPRAGSDAGGRQDGLLWYKDSGQHLNGEFSMAVVQANNLLEDQSQIESGTLSSNESGPYGTFVGVYDGHGGPETSRFINNYLFHHLKRFTSEQQTMSADVIRKAFQATEEGFMSLVAREWPMNPQVAAVGSCCLVGVICNGTLYVANLGDSRAVLGRVVKATGEVLAMQLSTEHNAALESIRQELHSFHPDDSNIVVLKHNVWRVRGLIQVSRSIGDVYLKKPEFNREPLYAKFRLREPFERPILSSEPSIHVHQLLPQDRFIIFASDGLWEHLSNQEAVDIVQNNPHSGSARKLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVYLDSNLVSRASTGKFPSVSIRGGGVNLPHNTLAPCTTPTEAGGN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0288 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Dod06g0288 397 SMART PP2C_4 39 353 IPR001932 -
Dod06g0288 397 PANTHER ALPHABET, ISOFORM E-RELATED 5 387 - -
Dod06g0288 397 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 387 - -
Dod06g0288 397 Gene3D - 37 365 IPR036457 -
Dod06g0288 397 CDD PP2Cc 48 355 IPR001932 -
Dod06g0288 397 Pfam Protein phosphatase 2C 69 324 IPR001932 -
Dod06g0288 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Dod06g0288 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0288 Dod-Chr6 3899064 3904042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0288 1 396 PP2C-type Phosphatase Gene Family AT4G38520 73.737 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0288 - K01102 gmx:100794801 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0288 06 3899064 3904042 Dod06g0288 06 3899064 3904042 ECH