Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0272 ATGGGAAGTTGTGGAAGAGAAGGAGCTGTGAGGCAGTATATAAGATCGAAGGTGCCTCGTTTAAGATGGACACCTGAGCTGCATCGCTGCTTTGTTCATGCCATTGAGAGCCTTGGTGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTGATGGACATAAAAGGGCTCACAATTTCACACGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGACTTGAGCAGACAAGGTAGGATATCCACCCAACATAGAAACCAGTCTTTTGAGGAGCAGGATGATGGTTGTGTTGATGAAGTGAATGATGTTAGTGTTCATCACTACCCTTGCTCAAAACCCATTGGAAAAGAATCCGATTCCCTCTTCGGATACAGTAACTTCTCCCCAAAAAGGGCTAGGATTGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAATGCAGCCAACAAAGAATAATATGTGATGCAGCAGTAGTCCCAAATCCGTACTGCTTTTATGATTATGTTCAGCCCTTAGCCTTGGGTGATCAGCACAAGGGAATAAAGGAAGTTTGTGGTGGTTCAAGATGGCAGACACAACCACCCCATTCCACACCATTCCCTTTGCTGCAAGATTTTGGTGCCAACCTCAGTTCATTCAAATGTCCAAAGCAAGAATCTGGTTTCCTCCAGGTTTCTAAATTAAATGATAGAGAGACCACTGTGCAGCCAATGAATGTAATTTTGAACTCTGAGAGGGCACATGCAGAAGATGAAGATGTAGGAGGGTGTGAGTTGTCATTGTCGCTAACATTGCCAAACCCTTCCCCTCAGAGAAGTAATGTTTCTTCGGCCAGTGAGATCAGTGAGGCAATCTCATCATGCCCCGGCTTCACTAACTACAAAGGCTGCTCTAGTTCTTCCACTGTCAAAAACAGAATTAATTTAGACCTATCTTTAGCCCTTTGTGGGAACTGA 963 0.4496 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIESLGGHHKATPKLVLQLMDIKGLTISHVKSHLQMYRSMRGDLSRQGRISTQHRNQSFEEQDDGCVDEVNDVSVHHYPCSKPIGKESDSLFGYSNFSPKRARIETRSSISESLQCSQQRIICDAAVVPNPYCFYDYVQPLALGDQHKGIKEVCGGSRWQTQPPHSTPFPLLQDFGANLSSFKCPKQESGFLQVSKLNDRETTVQPMNVILNSERAHAEDEDVGGCELSLSLTLPNPSPQRSNVSSASEISEAISSCPGFTNYKGCSSSSTVKNRINLDLSLALCGN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0272 320 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Dod06g0272 320 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 320 IPR044848 GO:0003700
Dod06g0272 320 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Dod06g0272 320 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 320 - -
Dod06g0272 320 SUPERFAMILY Homeodomain-like 17 73 IPR009057 -
Dod06g0272 320 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Dod06g0272 320 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0272 Dod-Chr6 3711366 3716248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0272 1 74 G2-like Transcription Factor Family AT1G14600 72.152 5.06e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod06g0272 Myb_DNA-binding 4.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0272 - - gmx:100787188 407.142