Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0265 ATGAAGGAACAGCATTCATTGCCACCATCATCGTCAACAACTCCGGCTGCACCAACTCAGAAGAAAAAAAGAAACCAACCTGGAACACCAAATCCAGATGCGGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAACAAAGGGTTCCAAAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTGCCTTGGAAGCTTAAGCAGAAGACTACAAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTCCACCATGACCCTTCAAGGGCACTTGGTGACCTCACTGGGATTAAGAAGCACTACTCTCGCAAGCATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAGTACGCCGTTCAATCCGACTGGAAAGCTCATTCTAAGACTTGTGGCACTAGAGAATACCGATGTGACTGTGGCACCCTCTTCTCCAGGCGAGACAGTTTCATCACCCACAGGGCCTTCTGTGATGCGCTGGCTCAAGAAAGTGCAAGACAGCCACCCAACCTGAGCAGTGCAATTGGGAGCCACCTATATGGAAGCAGCAACAACATGGCCTTAGGCTTATCTCAGGTGGGTCCCCACATACCCACCATGCAAGACCATACCAACAACACCACCACCCAATCTAGCAGCCATGACCTCTTGCGTCTTGCAGGAGCTGGTCGAACCGGCCAACTAGATCACATCCTTCCACCATCCATAATTAGACCTTCACACCAAACTATGCCCCCATCAGCAGCTTCATTCTTCATGAATGAACAATCAACACAAAACTATCACCATGACCAACAAGGCTTGGTGCACAACAAGCCATTGTTCCAAGGACTAATGCACTTGTCTGACCTTAACAACCATCAAAGCAGCAGCAACATGGATAATTCCCCATCAGGTGGTGGAGGAGCCAATAATAACAACCTCTTCAACATTCCCTTCCTTTCAAGCAACAGCACTAACAGCAGCAACAACTCCTTCTCTGAACACTTCAACAACAGTGGAAGTGGCAGTGGAAACAATGAAGGGACCAATAACAATTTCTTCACTGCGGGTAATAGTGCTATAATGGGTGTTGGGGGCCACCATCACCAAACAACCTCATCATGTGCACCTTCACTCTTCAGCACTTCTCTCCAAAGCAACAACAACAACACAAGCAGTGCCATGTCTCACATGTCCGCAACTGCACTCCTTCAGAAGGCGGCACAAATGGGTGCAACTTCTTCCAGCAACAACGGCACTGCATCACTTCTCAAGAGCTTCGGAAGCGCTTCCTCTAGCAGCGGATCAAAACCTGAACATCATCATCATCACAGGCCAATGATTAATAATGCTGCTGCTGCTGCAGCTGCAAATTATGGAAGCATTTTTGGGAACGAACAGGGCAACCTGCAGGACCTTATGAACTCGTTTGCTGCTGCTAGTGGTGGCGGCAACACTTCCATCTTCGAAAGTGCAGGAGGGTCTTCCGTAGGGATCACTGGGTTTGAAGCATATGATCATGGCTCCAACAGGGACCCAAAACTGCAAGGAGTGAGTATTGGAGCTGGCTCTGATAGGCTCACTAGGGACTTTCTAGGCGTTGGTCATATAGTGAGAAGCATGAGTGGTGGTGGTGGTGGTGGTGGAGGGGTTTCACAAAGAGAACAGCAACAACAACAACATGGATTCACCTTGAGCTCTTTGGAGGCAGAAAGAAGTAATGCTGCGCCGCCAGGCCAATCTTTTGGTGGTGGTGGTTGTGGACGGAATTTTCAGTGA 1812 0.4884 MKEQHSLPPSSSTTPAAPTQKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSSAIGSHLYGSSNNMALGLSQVGPHIPTMQDHTNNTTTQSSSHDLLRLAGAGRTGQLDHILPPSIIRPSHQTMPPSAASFFMNEQSTQNYHHDQQGLVHNKPLFQGLMHLSDLNNHQSSSNMDNSPSGGGGANNNNLFNIPFLSSNSTNSSNNSFSEHFNNSGSGSGNNEGTNNNFFTAGNSAIMGVGGHHHQTTSSCAPSLFSTSLQSNNNNTSSAMSHMSATALLQKAAQMGATSSSNNGTASLLKSFGSASSSSGSKPEHHHHHRPMINNAAAAAAANYGSIFGNEQGNLQDLMNSFAAASGGGNTSIFESAGGSSVGITGFEAYDHGSNRDPKLQGVSIGAGSDRLTRDFLGVGHIVRSMSGGGGGGGGVSQREQQQQQHGFTLSSLEAERSNAAPPGQSFGGGGCGRNFQ* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0265 603 MobiDBLite consensus disorder prediction 562 585 - -
Dod06g0265 603 MobiDBLite consensus disorder prediction 434 455 - -
Dod06g0265 603 MobiDBLite consensus disorder prediction 1 35 - -
Dod06g0265 603 Gene3D Classic Zinc Finger 29 98 - -
Dod06g0265 603 MobiDBLite consensus disorder prediction 337 362 - -
Dod06g0265 603 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Dod06g0265 603 SUPERFAMILY beta-beta-alpha zinc fingers 49 146 IPR036236 -
Dod06g0265 603 MobiDBLite consensus disorder prediction 301 324 - -
Dod06g0265 603 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 3 565 - -
Dod06g0265 603 Gene3D Classic Zinc Finger 104 183 - -
Dod06g0265 603 Pfam Zinc-finger double-stranded RNA-binding 50 72 IPR022755 -
Dod06g0265 603 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 3 565 - -
Dod06g0265 603 MobiDBLite consensus disorder prediction 1 27 - -
Dod06g0265 603 MobiDBLite consensus disorder prediction 553 603 - -
Dod06g0265 603 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 72 IPR013087 -
Dod06g0265 603 SMART c2h2final6 50 72 IPR013087 -
Dod06g0265 603 SMART c2h2final6 126 146 IPR013087 -
Dod06g0265 603 SMART c2h2final6 91 121 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0265 Dod-Chr6 3604015 3610807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0265 20 557 IDZ Gene Family AT2G02070 47.130 2.63e-139 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g0265 zf-C2H2_jaz 3.7e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0265 K25870 - gmx:100786121 588.571