Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0238 ATGGACACCTCAAATCCTGCTGCGTTTGTAAATGCTGAGTTGCTTCCCAATTTCATAGGAAAGAGAGTACGAACAGTGGTTCAAGTGAATCAATGTGATGATGGTGTAACCGCTGCAAAATCCACAGATGACAAACAGCTGACTGTAAAAGGGTTGCCACAGGTCCCTCTTAGGAATTATGTTGAGGTCTTTGGTATTGCTGAAAGTAACCACTCCATTAATGCTGAAATATGGACTGACTTTGGCAACACCTTTGATACCAACTCGTACAATCAGTTATGCCAACTAGCAAATGGGGAATTCAGAGGTCTGTTTCTCTAG 321 0.4237 MDTSNPAAFVNAELLPNFIGKRVRTVVQVNQCDDGVTAAKSTDDKQLTVKGLPQVPLRNYVEVFGIAESNHSINAEIWTDFGNTFDTNSYNQLCQLANGEFRGLFL* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0238 106 Pfam Replication factor A protein 3 1 99 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Dod06g0238 106 Gene3D - 1 106 IPR012340 -
Dod06g0238 106 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 1 106 - -
Dod06g0238 106 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 1 106 - -
Dod06g0238 106 SUPERFAMILY Nucleic acid-binding proteins 5 98 IPR012340 -
Dod06g0238 106 CDD RPA3 6 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0238 Dod-Chr6 3348300 3349855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0238 1 106 Core DNA Replication Machinery Family AT4G18590 59.434 1.49e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0238 K10740 - gmx:100781484 186.037