Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0236 ATGGTTCCGAAATGGGCATCGAAGCCTTGCATCATGGGAATCGACGAAGCTGGAAGAGGCCCCGTTTTAGGGCCCATGGTGTACGGGTGCTTGTACTGCGCCCGCTCCTACCAGAACACCCTCTCCACTCTCAGCTTCGCCGATTCCAAAACCCTCAAAGAAGACAAGAGGGAGGAACTCTTCCAAGCTCTCAAGGCCAACGATTCCATTGGATGGGCCGTTGACGTCATTGACCCTAGGCAACTCTCCGCTAAAATGCTCCAGAAGAATAAGATTAACTTGAATGAGATATCACATGACTCCGCCATGGGCCTCATTGATAGGGTGCTCAAAATGGGAGTGCTCCTTACCGAGGTTTATATAGATACAGTTGGAGATGCAGGGAAATATGAAATGAAACTGTCCAAATGTTTTCCATCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTCAGTGGTGCTAGCATAGTTGCAAAGGTCACAAGAGACCAAGCTTTAAGAGATTGGGTTCTTGATGAGACTGCTGAAAACATGCACAGGAACTTTGGCTCTGGATATCCTGGAGATCCTCATACCAAGTCTTGGCTGGAAGATCACAAGCATTCTGTCTTTGGATTTCCAACATTGGTCCGGTTTAGTTGGGGAACCTGCAATACTTATTTTAAAGATGGTGCAGAAGTCTTGTGGGAGTCTGACAAAATGGATGAAGATGGCAGTAGCAATAATAATGGCAAGCGGCAATTGAAATTAAGCAATGTGGGCTTCACAACATCCAAGAGAAAGAGTGAAGAGATAGAATCAAGTGGTAAAGGGCGCTGTAGGTTTTTCCAGGCTAGGAAACTAGAGCACCTCACTTATTTCACAAAATGA 885 0.4542 MVPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYQNTLSTLSFADSKTLKEDKREELFQALKANDSIGWAVDVIDPRQLSAKMLQKNKINLNEISHDSAMGLIDRVLKMGVLLTEVYIDTVGDAGKYEMKLSKCFPSIKFVVAKKADSLYPVVSGASIVAKVTRDQALRDWVLDETAENMHRNFGSGYPGDPHTKSWLEDHKHSVFGFPTLVRFSWGTCNTYFKDGAEVLWESDKMDEDGSSNNNGKRQLKLSNVGFTTSKRKSEEIESSGKGRCRFFQARKLEHLTYFTK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0236 294 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 9 231 IPR024567 GO:0004523
Dod06g0236 294 PANTHER RIBONUCLEASE 2 292 - -
Dod06g0236 294 Pfam Ribonuclease HII 12 222 IPR024567 GO:0004523
Dod06g0236 294 TIGRFAM TIGR00729: ribonuclease HII 11 224 IPR004649 GO:0004523|GO:0016070
Dod06g0236 294 Gene3D Ribonuclease hii. Domain 2 182 231 IPR023160 GO:0004523
Dod06g0236 294 PANTHER RIBONUCLEASE H2 SUBUNIT A 2 292 IPR001352 GO:0003723|GO:0004523
Dod06g0236 294 CDD RNase_HII_eukaryota_like 12 231 - -
Dod06g0236 294 SUPERFAMILY Ribonuclease H-like 10 227 IPR012337 -
Dod06g0236 294 MobiDBLite consensus disorder prediction 238 275 - -
Dod06g0236 294 MobiDBLite consensus disorder prediction 248 263 - -
Dod06g0236 294 Gene3D - 1 181 IPR036397 GO:0003676
Dod06g0236 294 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0236 Dod-Chr6 3338360 3340767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0236 1 292 Core DNA Replication Machinery Family AT2G25100 65.411 4.69e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0236 K10743 - gmx:100779875 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0236 06 3338360 3340767 Dod06g0236 06 3338360 3340767 ECH