Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0184 ATGAAATTTAGCTGCAATGGGTGCCGTATACTGCGCAAAGGTTGCAGTGACAACTGCATCATAAGGCCATGCCTTGAGTGGATCAACTCCCCTCAGTCCCAAGCCAATGCCACCCTCTTCCTTGCCAAATTCTATGGACGCACTGGCTTGCTTAACCTCATCACCGCCGCTCCCCAACACCTTGCCCCAGCTGTGTTCAGATCATTGTTGTATGAGGCTTGCGGGAGAATAGTGAATCCAACATATGGGTCAATGGGCTTGTTCTGGACCGGAGAATGGGCCCGATGCGAAGCCGCCGTGGACGCTGTGTTGACGGGGAGCAAGATCAACGGCGTGGCAGTTTCTGATTGGCCGAACGCAGGGAGACTCGGTGTTGACCATGATCTCCCAGTTTCTGATATACGGCACGTGCCAAGAATGACCGGCCTGACGGACGTGAGAGAGAGAACCCGGTTCAAGAGAACCGGGGAAGTGATCAGGCCCCAACCTCGAGTGGGTTCGGTGGGCTCCGCTGCGCTGTGGAAAATGGGTTGGGATAGTGAGAGATCTGAAACCGTGGAGGCTTCGTTGCTGAGCCATCTCGAGGCGAACCGAACCGGTGAAACCGGGGTCGACTTGGACCTGGAGCTCTCTCTTGGCTTCCATTGCCAATCAGCCACCAGCAAGCCAAGATTTTATTAA 681 0.5492 MKFSCNGCRILRKGCSDNCIIRPCLEWINSPQSQANATLFLAKFYGRTGLLNLITAAPQHLAPAVFRSLLYEACGRIVNPTYGSMGLFWTGEWARCEAAVDAVLTGSKINGVAVSDWPNAGRLGVDHDLPVSDIRHVPRMTGLTDVRERTRFKRTGEVIRPQPRVGSVGSAALWKMGWDSERSETVEASLLSHLEANRTGETGVDLDLELSLGFHCQSATSKPRFY* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0184 226 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Dod06g0184 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 223 - -
Dod06g0184 226 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Dod06g0184 226 PANTHER LOB DOMAIN PROTEIN 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0184 Dod-Chr6 2747063 2748612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0184 1 158 AS2 family AT3G02550 53.892 5.87e-61 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod06g0184 LOB 3.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0184 - - gmx:100779034 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g0184 06 2747063 2748612 Dod06g0184 06 2747063 2748612 ECH
Dod06g0184 06 2747063 2748612 Dod01g0549 01 9593618 9595932 ECH