Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0154 ATGCAAACGCAACCTCAGCGTGAGAGCTCCAGAAGTTCAATCCATCAGCCGAATGTGACCAGTGTCAAGGACGACCTGACAATGATGAGAGACCACGAGGCCGTTGTTTTCTTGACAGCGCTGGAAATTTTTACTGCGCCAGAAGGTCTAGGTGTTGGACCATGTATCATACTTGGGTTGATCCTCCTCACTTTACAGCACCGCAAACGGAGGCATGGTCGTGCACACGTCCAACTCCAATCAACAATTGCTTCTGCTGTTTCTAGCTCCAGTGATCACGCACAGACTGACAGGCTCTTCTTTGGGGTACCTATATTCTCTTATAAGGAGCTTCAAGAAGCAACTAACAATTTTGACTGCACTAGAAAGCTAGGAGAAGGAGGCTTCGGCAGGGTTTACTATGGAAAACTCGTTGATGGAAGGGAAGTTGCAGTCAAACACCTATTTGCTCACAGCTACAGGAGAGTAGAACAGTTTATGAATGAGATTAAGATCCTTACTTGCTTGCGCCACAGAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTGACAGCTGTGAGCTACTTCTTGTGTATGAATACATTCCAAATGGAACAGTTGCGTCTCATCTCCGCGGTGATTTATCAAGGGCAGCTAAGAGTGATGTGTACAGTTTTGGGGTTGTGCTCATAGAGCTGATATCATCTTTGCCAGCTGTTGATGCAACTAGGGAAAGGGATGAAATAAACTTGGCAAGTCTAGCTGCAAAGAAGATTCAAAAGTGTGCATTGAGGGAGCTTTTGGACCCTTCCCTTGGTTTTGAGTCAAACCAAGAAGTTAGAAGGAAGCTAACTGCAGTGGCGGAATTGGCTTTCCAGTGTGTGCAGGTGGACAAGGAATTAAGGCCTTCCATGGAGGAAGTCCTGAATGCACTCAAGAAAATTGAAGGTGGGAGTTTAGAGTCTGAGCAGCTAGAGAAAGGAGGTGAAAATGATGGTGCTGTGATCTCGCAGAGTGAAGAAGTACAACCACCATCAATGGCTTCAGGGGACAGGAGTCAAGTTAGATTCTCAATGAATAAGAAGCTGCGATCTTCACCAAAATCCTTGACTGAGAAATGGGAAAGTGAATCTACTACCCCTAGTGCCAGTGCTTAA 1137 0.4591 MQTQPQRESSRSSIHQPNVTSVKDDLTMMRDHEAVVFLTALEIFTAPEGLGVGPCIILGLILLTLQHRKRRHGRAHVQLQSTIASAVSSSSDHAQTDRLFFGVPIFSYKELQEATNNFDCTRKLGEGGFGRVYYGKLVDGREVAVKHLFAHSYRRVEQFMNEIKILTCLRHRNLVSLYGCTSRDSCELLLVYEYIPNGTVASHLRGDLSRAAKSDVYSFGVVLIELISSLPAVDATRERDEINLASLAAKKIQKCALRELLDPSLGFESNQEVRRKLTAVAELAFQCVQVDKELRPSMEEVLNALKKIEGGSLESEQLEKGGENDGAVISQSEEVQPPSMASGDRSQVRFSMNKKLRSSPKSLTEKWESESTTPSASA* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0154 378 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 212 377 - -
Dod06g0154 378 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 49 212 - -
Dod06g0154 378 SUPERFAMILY Protein kinase-like (PK-like) 103 308 IPR011009 -
Dod06g0154 378 MobiDBLite consensus disorder prediction 313 378 - -
Dod06g0154 378 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Dod06g0154 378 MobiDBLite consensus disorder prediction 1 23 - -
Dod06g0154 378 ProSiteProfiles Protein kinase domain profile. 118 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod06g0154 378 Pfam Protein tyrosine and serine/threonine kinase 120 206 IPR001245 GO:0004672|GO:0006468
Dod06g0154 378 Gene3D Transferase(Phosphotransferase) domain 1 193 327 - -
Dod06g0154 378 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 212 377 IPR044652 -
Dod06g0154 378 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 49 212 IPR044652 -
Dod06g0154 378 Gene3D Phosphorylase Kinase; domain 1 89 192 - -
Dod06g0154 378 MobiDBLite consensus disorder prediction 329 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0154 Dod-Chr6 2216105 2219499 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0154 213 378 Receptor kinase-like Gene Family AT1G25390 46.988 8.50e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Dod06g0154 PK_Tyr_Ser-Thr 3.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0154 - - aip:107616167 245.743