Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod06g0129 | ATGGGTTTGCAAAATCAGTTAAACGACGTGTCGTCCGGTTCGATTCCTTTGCTGGTGTTGGCGCACATAGCCACCTGCATCAGCTACCTGCGTTCCATGCTCCTCGCCCTCCTCCAATCCTTCGGCCTCTCCCGCTTCCCCTCCAACCAGATCGTCGACGACGGGCTATTCGCCGCCGTCGGATCCGGCCTCGCCGGCCTCATCATGCTCTCCGATCAGCTTGCAATCAACGGCCGCTTCGTCTACACTTACGCCGCCGAACACGGCGGCGACGGCGACAGCTGCGTCGTGTGCCAGAGCGCCTTCAAGGACGGTGACCATGTCCGGAAGCTGCCGTGCCGCCACGTGTTCCACCGCCTCTGCTTCGACGGCTGGCTCCACCACTACAAGTTCAATTGCCCCCTCTGCCGCTCGCCCTTACTCTCCGAGGAGGGCGTGGCCTTCACGGAGCGCCGCGTTGGTCGCGAAGTCGTCTCCTGGTTCTCCCTTCGGTGA | 495 | 0.6263 | MGLQNQLNDVSSGSIPLLVLAHIATCISYLRSMLLALLQSFGLSRFPSNQIVDDGLFAAVGSGLAGLIMLSDQLAINGRFVYTYAAEHGGDGDSCVVCQSAFKDGDHVRKLPCRHVFHRLCFDGWLHHYKFNCPLCRSPLLSEEGVAFTERRVGREVVSWFSLR* | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod06g0129 | 164 | SUPERFAMILY | RING/U-box | 75 | 142 | - | - | |
Dod06g0129 | 164 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 94 | 137 | - | - | |
Dod06g0129 | 164 | SMART | ring_2 | 95 | 136 | IPR001841 | - | |
Dod06g0129 | 164 | ProSiteProfiles | Zinc finger RING-type profile. | 95 | 137 | IPR001841 | - | |
Dod06g0129 | 164 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 81 | 150 | IPR013083 | - | |
Dod06g0129 | 164 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHA2A | 1 | 162 | - | - | |
Dod06g0129 | 164 | Pfam | Ring finger domain | 93 | 137 | IPR001841 | - | |
Dod06g0129 | 164 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 162 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod06g0129 | Dod-Chr6 | 1743500 | 1744578 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod06g0129 | 1 | 163 | C3H Transcription Factor Family | AT1G15100 | 51.534 | 8.46e-49 | 153 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod06g0129 | K16282 | - | gmx:100797628 | 248.44 |