Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0129 ATGGGTTTGCAAAATCAGTTAAACGACGTGTCGTCCGGTTCGATTCCTTTGCTGGTGTTGGCGCACATAGCCACCTGCATCAGCTACCTGCGTTCCATGCTCCTCGCCCTCCTCCAATCCTTCGGCCTCTCCCGCTTCCCCTCCAACCAGATCGTCGACGACGGGCTATTCGCCGCCGTCGGATCCGGCCTCGCCGGCCTCATCATGCTCTCCGATCAGCTTGCAATCAACGGCCGCTTCGTCTACACTTACGCCGCCGAACACGGCGGCGACGGCGACAGCTGCGTCGTGTGCCAGAGCGCCTTCAAGGACGGTGACCATGTCCGGAAGCTGCCGTGCCGCCACGTGTTCCACCGCCTCTGCTTCGACGGCTGGCTCCACCACTACAAGTTCAATTGCCCCCTCTGCCGCTCGCCCTTACTCTCCGAGGAGGGCGTGGCCTTCACGGAGCGCCGCGTTGGTCGCGAAGTCGTCTCCTGGTTCTCCCTTCGGTGA 495 0.6263 MGLQNQLNDVSSGSIPLLVLAHIATCISYLRSMLLALLQSFGLSRFPSNQIVDDGLFAAVGSGLAGLIMLSDQLAINGRFVYTYAAEHGGDGDSCVVCQSAFKDGDHVRKLPCRHVFHRLCFDGWLHHYKFNCPLCRSPLLSEEGVAFTERRVGREVVSWFSLR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0129 164 SUPERFAMILY RING/U-box 75 142 - -
Dod06g0129 164 CDD mRING-H2-C3H2C2D_ZSWM2 94 137 - -
Dod06g0129 164 SMART ring_2 95 136 IPR001841 -
Dod06g0129 164 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Dod06g0129 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 150 IPR013083 -
Dod06g0129 164 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 162 - -
Dod06g0129 164 Pfam Ring finger domain 93 137 IPR001841 -
Dod06g0129 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0129 Dod-Chr6 1743500 1744578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0129 1 163 C3H Transcription Factor Family AT1G15100 51.534 8.46e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0129 K16282 - gmx:100797628 248.44