Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0047 ATGATCTCCACCATGGCCAATTCCCCCAACTCTTCCAGTTCCAACCATGAGAATGGTGTTGGTGGTACTGGTACCAACGCCTTTAGAATCAGCCCCTCACCTTCTGACCCCACCATCACCGAACTTCTTCATCACCCTCAAATTAATGAACCTCTGTCAATTAATGGAGATGATGAAATGGTGACTCACCAAAGGGTAAGTGAGCTCAGAAGCAGGTCCTTGCTGACAACACCAACGACATCATCGTCCAATGAGGGCGGTAACACCATGACTGAGATAGCAAAAACCATGCTGAGATCTCATCTTCTGTACGCATCTTCTATCAGCGACCGTTTGATGCCAGATCAACCCAATCACAACCACCTCAATCATCATCGAAGCCCCAGTCTCCAGAACAAGAGCGTGTCTTTTCAACAGTACTCTCCCATGGATTATACCTGTGTCACAAACTCAGAGTGCTTTGATGATGATGTTCTTGATTATCCAACCCTGTGCGGTCACATAGCTCGTCCTCACTTGTCACCACGTAAACAGCCAAGCCAGACAAGGCTTGCAATCACACGCCCTAACCCTGATGAGCCTACTAATTGTGATGCCAAAGGCAAGAAACCTGTTACTACTAGTGCTCCTCCTTCAATTGAATATTTCCCTGATGAGACTACTGTACATAAGAGAGGAATCACGAATAAACCGAATAGAAACGACAATCATAGCCCTGCAGGTGCTCAAAACCCAAAGCCGGAGGTGCGGGTGGTCGGCATCGATGGTGATTCTGATGATGGAGACAATGAGGAGGGCTATGATGGTCGAATCCACAGCCTCCCATGCCAAAAACATGGACCTTACACATGCTCAGAGTGCATGAAAGTGTTCCCTACGTCGCAACACTTTGCGGCTCATGCGGCTGCCGATCACTACAAGTATGAGACCAAAGAGCAGAGAAGGAAGAGACAGATCGCCAAGGTGCGAAGGAGGGCACTCAAACTTCAACAGGTAAAGGATGGCCTCACTTGTGTTCCAATTTTTTATGAGTGGGAGGATGCAGGTGGTGCAGTACTTGCAGGAAACAGCTCCGCAGAAAAGTCCGCTAACGGTGGAGGTGGTGGTCGCAAGGTGAAAGAACAATCTGCTATTGATGCACGTGCCAATGATTCGGTTGTTCCTCCTGGCTTTGAAGGTGCAGGAATCAAGAGGGAGGGAGGCTTCTCTTCTGCGTAA 1218 0.4852 MISTMANSPNSSSSNHENGVGGTGTNAFRISPSPSDPTITELLHHPQINEPLSINGDDEMVTHQRVSELRSRSLLTTPTTSSSNEGGNTMTEIAKTMLRSHLLYASSISDRLMPDQPNHNHLNHHRSPSLQNKSVSFQQYSPMDYTCVTNSECFDDDVLDYPTLCGHIARPHLSPRKQPSQTRLAITRPNPDEPTNCDAKGKKPVTTSAPPSIEYFPDETTVHKRGITNKPNRNDNHSPAGAQNPKPEVRVVGIDGDSDDGDNEEGYDGRIHSLPCQKHGPYTCSECMKVFPTSQHFAAHAAADHYKYETKEQRRKRQIAKVRRRALKLQQVKDGLTCVPIFYEWEDAGGAVLAGNSSAEKSANGGGGGRKVKEQSAIDARANDSVVPPGFEGAGIKREGGFSSA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0047 405 MobiDBLite consensus disorder prediction 356 405 - -
Dod06g0047 405 MobiDBLite consensus disorder prediction 175 189 - -
Dod06g0047 405 ProSiteProfiles Zinc finger C2H2 type domain profile. 282 310 IPR013087 -
Dod06g0047 405 ProSitePatterns Zinc finger C2H2 type domain signature. 284 305 IPR013087 -
Dod06g0047 405 MobiDBLite consensus disorder prediction 1 39 - -
Dod06g0047 405 MobiDBLite consensus disorder prediction 168 266 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0047 197 332 C2H2 Transcription Factor Family AT5G22990 34.559 9.99e-18 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod06g0047 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0047 - - qsu:111987582 111.694