Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0043 ATGCGTCGGTGGCTTTGTTGCACTTGTCAGGTAGAAGAGTCTTACCCATCAACTGAAAATGAGCACCTGAAAAGCCCAAGGAATTATGGAGATGGCAACCAAAAAGGCTCAAAGGTGTCAGCTCCTGTCAAACCTGAAACACAAAAGGCACCACCACCTATCGATGTTCCAGCATTATCTTTGGAGGAACTGAAGGAAAAGACTGACAACTTTGGGTCAAAGGCATTGATTGGCGAAGGATCATATGGAAGGGTGTATTTTGCAACCTTAAACGATGGAAAAGCTGTGGCTGTGAAAAAGCTTGATGTTTCGTCTGAACCTGAATCAAATACTGAGTTCTTGACCCAGGTCTCCATGGTTTCAAGGTTGAAGAATGAAAATTTTGTTGAGTTGCATGGTTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAGGGGGCACAACCTGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGATTAGAATATTTACATGAGAAAGTTCAACCACCTATTATACACAGAGATATCAGATCAAGTAATGTGCTCATCTTTGAAGATTTCAAGGCTAAGATAGCTGATTTTAACCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAATATGCAATGACTGGCCAGTTGACTCAAAAAAGTGACGTTTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACGGGAAGAAAACCTGTTGATCACACCATGCCCCGTGGACAGCAAAGTCTTGTTACATGGGCTACCCCAAGATTGAGTGAAGACAAAGTTAAACAATGTGTTGACCCAAAAATGAAGGGTTATCCCCCTAAAGGAGTTGCCAAGCTTGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAGGCTGAGTTTAGGCCAAATATGAGCATCGTTGTTAAAGCACTCCAACCACTTCTGAAGACTCCTGTTCCTGCTGCTCCAGAAAGTTGA 1089 0.4343 MRRWLCCTCQVEESYPSTENEHLKSPRNYGDGNQKGSKVSAPVKPETQKAPPPIDVPALSLEELKEKTDNFGSKALIGEGSYGRVYFATLNDGKAVAVKKLDVSSEPESNTEFLTQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDFKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKMKGYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPVPAAPES* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0043 362 PIRSF ILK 15 356 - -
Dod06g0043 362 Gene3D Phosphorylase Kinase; domain 1 37 147 - -
Dod06g0043 362 MobiDBLite consensus disorder prediction 14 55 - -
Dod06g0043 362 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Dod06g0043 362 SUPERFAMILY Protein kinase-like (PK-like) 51 348 IPR011009 -
Dod06g0043 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Dod06g0043 362 Pfam Protein tyrosine and serine/threonine kinase 76 348 IPR001245 GO:0004672|GO:0006468
Dod06g0043 362 Gene3D Transferase(Phosphotransferase) domain 1 149 356 - -
Dod06g0043 362 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 1 361 - -
Dod06g0043 362 SMART tyrkin_6 71 348 IPR020635 GO:0004713|GO:0006468
Dod06g0043 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 361 - -
Dod06g0043 362 ProSiteProfiles Protein kinase domain profile. 71 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0043 Dod-Chr6 606081 611046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0043 5 349 Receptor kinase-like Gene Family AT4G02010 46.991 6.75e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dod06g0043 PK_Tyr_Ser-Thr 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0043 K13436 - gmx:100790016 692.575