Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0005 ATGGCTGCTGTCTTTACAATTACAACAACGGCGACAGCAACGATGTTGTCAATTGTTCCAGGAAACAGAAACAGAAGCAGAGCTTTGAACCCTAACCCTGCCAGTTCCAGTGTTGGAGCAAGAGCAAGTGCTACCTCATGGAAGCTCAAGCACACATGGAATCTGGATGTGACGGTGAATGGTGATTGGGCGGCGCGTGGACCACCACTTGCACCGATAAGAAAGAGAAAGGGTTTGGTCCGGGCGAGTTCGGAGGATACAGTGACAGCCCCTTTACAGTCGAAAGTGACTCACAAAGTATACTTTGATATCAGCATCGGAAATCCAGTTGGGAAGCTTGCCGGGAGGATTGTGATTGGACTGTACGGTGACGATGTGCCCCAAACTGCAGAGAACTTCCGTGCCCTCTGCACTGGAGAGAAGGGCTTTGGCTACAAGGGATCCACCTTCCATCGTGTAATCAAGGATTTCATGATTCAAGGAGGAGACTTTGACAAAGGAAATGGGACTGGAGGCAAAAGTATTTACGGTCGTACTTTCAAGGATGAGAATTTTAAACTGTCTCATGCTGGACCTGGAGTTGTTAGCATGGCAAATGCAGGCCCCAACACGAATGGGAGTCAGTTTTTCATATGCACTGTGAAGACACCGTGGCTGGATCAGAGGCATGTGGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGCTGATTGAGTTGCAGGAGACAGATCGGGGTGACCGTCCCAGAAAGAAGGTGACTATCAGTGACTCTGGTGAGCTTCCAATTGCTTGA 798 0.4887 MAAVFTITTTATATMLSIVPGNRNRSRALNPNPASSSVGARASATSWKLKHTWNLDVTVNGDWAARGPPLAPIRKRKGLVRASSEDTVTAPLQSKVTHKVYFDISIGNPVGKLAGRIVIGLYGDDVPQTAENFRALCTGEKGFGYKGSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHAGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIELQETDRGDRPRKKVTISDSGELPIA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0005 265 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 145 162 IPR020892 GO:0003755|GO:0006457
Dod06g0005 265 CDD cyclophilin_ABH_like 98 260 - -
Dod06g0005 265 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC 73 262 - -
Dod06g0005 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 208 220 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 150 162 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 136 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 193 208 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 221 236 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 73 262 - -
Dod06g0005 265 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 112 258 IPR002130 GO:0000413|GO:0003755
Dod06g0005 265 Gene3D - 85 264 IPR029000 -
Dod06g0005 265 SUPERFAMILY Cyclophilin-like 90 262 IPR029000 -
Dod06g0005 265 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 111 261 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0005 Dod-Chr6 108696 110988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0005 115 256 U-box Gene Family AT5G67530 48.951 5.93e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0005 K03768 - zju:107417611 347.051