Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g0003 ATGATGGCTTTAGAGCAGCAATTATCCCTGGGTCAGAATCCAAACCCCGTTGACGGCGAAGCAGACGGAACCAGTAACGGCGTGGATGCTCGACCGGCATCAACAGACGGCGGAGATGATGGAGGCAAGACTCCGAGACTGCCCCGGTGGACAAGACAGGAGATTCTGGTTCTGATACAGGGAAAGAGAGACGCAGAGAACAAGTTTCGGAGGGGTAGAACCGCTGGCCTGCCATTCGGGTCGGGTCAGGTGGAGCCTAAATGGGCATCGGTGTCCTCTTACTGCAGAAAGCATGGAGTGAACAGGGGTCCGGTTCAGTGCCGTAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATAAGGGAGGAGGCGGATTCGTTTTGGGTCATGAGGAACGATTTAAGGAGAGAGAGGAAATTGCCCGGCTTCTTCGACAAGGAGGTCTATGATATCCTGGATTCTGGGTCGCCGGCTCAGACAACGGCTTTAGCTCTAGCTCTGTCGTCGCCGCCTGTGGTGGCCAAGGGTAAGCCGGAGGACTATGCTGAAGCCGAGCCACACCTCTACGATAGTAATCGGAGCGCGCCTGGTGAGGACGGCTTGTTCTCTGATTTTGAACAAGAAGAATTGGGTGCCACTGCTAGTCCCGAGAAGAAGGGTGATTTGCCGCCCACCATCACCAGCACCAACCCTATTCCTGCCCCTAATCCTATCTCAGAGAAGCAATATCAACAACCACTCCACAGCGGCAGCCAAGGTGAAGAAGGTGCGACCAATGAGAAACCACCAACTTCAAATCCGGCAATGGGTTCTACATCTCAAGGAGAACGGAAAAGGAAGCGATTAGCAACAGATGGAGCCGAGGAAACTTTGCAATACCAATTAATAGATGTCTTGGATCGAAATGGCAAAATGCTAAGCGCTCAACTTGAAGCGCAGAATATCAATTTCCAGTTGGATCGGGAGCAGCGGAAAGACTATACCAGTAACTTGGTTGCTGTACTTGATAAGCTTGCAGAAGCTCTGGGGAGAATTGCTGATAAATTATAG 1074 0.5158 MMALEQQLSLGQNPNPVDGEADGTSNGVDARPASTDGGDDGGKTPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREEADSFWVMRNDLRRERKLPGFFDKEVYDILDSGSPAQTTALALALSSPPVVAKGKPEDYAEAEPHLYDSNRSAPGEDGLFSDFEQEELGATASPEKKGDLPPTITSTNPIPAPNPISEKQYQQPLHSGSQGEEGATNEKPPTSNPAMGSTSQGERKRKRLATDGAEETLQYQLIDVLDRNGKMLSAQLEAQNINFQLDREQRKDYTSNLVAVLDKLAEALGRIADKL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g0003 357 Pfam Myb/SANT-like DNA-binding domain 49 138 IPR044822 -
Dod06g0003 357 Gene3D - 50 120 - -
Dod06g0003 357 ProSiteProfiles Myb-like domain profile. 49 115 IPR001005 -
Dod06g0003 357 MobiDBLite consensus disorder prediction 1 20 - -
Dod06g0003 357 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 357 - -
Dod06g0003 357 MobiDBLite consensus disorder prediction 230 281 - -
Dod06g0003 357 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 357 - -
Dod06g0003 357 MobiDBLite consensus disorder prediction 221 293 - -
Dod06g0003 357 MobiDBLite consensus disorder prediction 1 49 - -
Dod06g0003 357 CDD GT1 48 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g0003 Dod-Chr6 79081 82320 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g0003 35 123 Trihelix Transcription Factor Family AT1G76880 30.108 4.97e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod06g0003 Myb_DNA-bind_4 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g0003 - - gmx:100797767 484.952