Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2966 ATGGAACTGGAGAGTCAAGAAGGAGAAATACCAATCCCGATAAACAGCAGTAGTTACGGTGGGGGTGGGGTTGGGGGACACGGGAATGGGCACGGCCACTTGAATATTCATCATCATCATCATCATGACTCTCAGTCTCCGCACCACAACCACATGATGGGGGCTTCCTCAGCACCCCAAAACCTGCAGCCTTCAAACGGGTCATCCATGCAGCAGCAATTGCGAGAGGATCACGGGCCCTACAAAAAAGTTGTTCGGTACAGAGAGTGCCTCAAGAACCATGCAGCAGCCATGGGAGGGAATGCCACTGACGGGTGCGGCGAGTTCATGCCGAGCGGAGAGGAAGGCAGCATTGAGGCTCTCAACTGCTCTGCCTGCCATTGCCACAGAAACTTCCACAGAAAAGAAGTCGAAGGAGAGCCGCAGCCGCAGCCGCAGCCGCAGCCCCAGCCCCCCTTTGATCAGTACCACTTCAGCAGCAGCAGCAGGGGGACCAGCAGGAAGTTCCTTCTGCCTCACCACCACAACAAGAACATCAGCAGCATGCTCGCCCCTGAGGCTCTCGGGTACCCCACCGCTCCAGGCAACATCCTGCCTTCAAGGTCGGTGCCGCCCCACCACATGATCATGCCCTACAGCATAGGCGGGTCCCTCCCCTCCGAGTCCGACGAGCAGGACGGCGGCGGCGGCGGCGGCGGGGGCAGCGTGGCCCGGCCTGCACCGCAGCAGCTGGTGAAGAAGCGGTTCAGGACCAAGTTCACGCAGGAGCAGAAGGAGAAGATGCTCAGCTTTGCCGAGAAGGTGGGCTGGAAGATCCAGAAGCAAGAGGACTCTGTGGTGCAACAGTTCTGCCAAGAGATTGGAGTCAAGAGAAGAGTGCTCAAGGTTTGGATGCATAACAATAAGCACAACCTTGCCAAAAAGAGTATTATTAATCCCCCAACAACAGCGTGA 954 0.5734 MELESQEGEIPIPINSSSYGGGGVGGHGNGHGHLNIHHHHHHDSQSPHHNHMMGASSAPQNLQPSNGSSMQQQLREDHGPYKKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGSIEALNCSACHCHRNFHRKEVEGEPQPQPQPQPQPPFDQYHFSSSSRGTSRKFLLPHHHNKNISSMLAPEALGYPTAPGNILPSRSVPPHHMIMPYSIGGSLPSESDEQDGGGGGGGGSVARPAPQQLVKKRFRTKFTQEQKEKMLSFAEKVGWKIQKQEDSVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKSIINPPTTA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2966 317 MobiDBLite consensus disorder prediction 153 167 - -
Dod05g2966 317 SUPERFAMILY Homeodomain-like 239 307 IPR009057 -
Dod05g2966 317 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 87 136 IPR006456 -
Dod05g2966 317 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 86 137 IPR006456 -
Dod05g2966 317 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 246 302 IPR006455 -
Dod05g2966 317 Gene3D - 235 308 - -
Dod05g2966 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 36 308 - -
Dod05g2966 317 MobiDBLite consensus disorder prediction 213 243 - -
Dod05g2966 317 MobiDBLite consensus disorder prediction 32 46 - -
Dod05g2966 317 Pfam ZF-HD protein dimerisation region 85 137 IPR006456 -
Dod05g2966 317 MobiDBLite consensus disorder prediction 49 75 - -
Dod05g2966 317 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 36 308 - -
Dod05g2966 317 MobiDBLite consensus disorder prediction 1 76 - -
Dod05g2966 317 MobiDBLite consensus disorder prediction 137 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2966 Dod-Chr5 55568420 55571042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2966 1 312 ZF-HD Transcription Factor Family AT1G14440 46.462 1.50e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Dod05g2966 ZF-HD_dimer 3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2966 - - zju:107425323 369.392