Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2961 ATGGAAGGGGGGATACCGCACCCAATACCGAGAACAGTTGAGGAGGTTTTCAGCGACTTTAAGGGCAGGCGAGCTGGATTGATTAAAGCCCTCACCTCTGACGTTGATAAGTTTTACCAGCAGTGCGATCCTGATAAGGAGAATTTGTGTCTGTATGGATTTCCAAATGAAACATGGGAAGTGAATTTACCCGTTGAAGAAGTGCCTCCTGAACTTCCTGAACCAGCATTAGGCATAAACTTTGCCAGAGATGGCATGCAAGAGAAGGACTGGTTATCACTGGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCTCGCTTTGGATTCGGTAAGAATGAAAGGAAAAGGCTTTTCCAGATGATAAATGACCTGCCAACTATCTTTGAAATCGTGACAGGAAGCGCTAAGCAATCAAAGGACCAAGCAGCTGCTCACAACAATGGTAGCAAATGCAAATCAAGTGGAAAGGTGGTATGCGGTTTTCAATTTAATGCTCTTAGTTTATATCTCCATCACTTCCCCTGTGTGGAAAGTCACTTAGGTCTTCCTGTTTGGATGCTGCCTTTTATCAGTCCCGTCAGTCTGAGACTCTGGCCAAGGGAGTGA 627 0.453 MEGGIPHPIPRTVEEVFSDFKGRRAGLIKALTSDVDKFYQQCDPDKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEIVTGSAKQSKDQAAAHNNGSKCKSSGKVVCGFQFNALSLYLHHFPCVESHLGLPVWMLPFISPVSLRLWPRE* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2961 208 Pfam Alfin 12 139 IPR021998 GO:0006355|GO:0042393
Dod05g2961 208 PANTHER CPG BINDING PROTEIN 3 164 IPR045104 GO:0006355|GO:0042393
Dod05g2961 208 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 3 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2961 Dod-Chr5 55526658 55530915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2961 4 180 Alfin-like Transcription Factor Family AT2G02470 80.791 8.00e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2961 - - gmx:100807826 305.834