Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2954 ATGAGTGAAAGAATATTAGTAGCTCTGCTACTTGTTTTCAATTGTTTGTTGATTGCAGAAGGAGAAACGGCTAATGAGGATTTGGTTGCCCTGAAGTCTCTCATGGATACCTGGAAGAACTATCCTCCTAATTGGGTAGGGTCGGATCCTTGTGACGGTTGGGATGGAATTCAGTGCGAGGATTCGCGTGTTACATCCATAACATTACCAAGCATGGGTTTGACAGGCAAGCTTTCCGGAGATATTGGATCACTATCTGAGTTAGAGTCTTTAGATCTATCTTACAACAAGGATTTGACAGGGTCAGTTCCAAAGGACATTGGAGAGTTGAAGAAACTGTCAACCTTAATTCTCGTTGGCTGTAGCTTCAATGGTCCTATTCCAGACGAAATTGGATATCTGAAGGAGCTCCGCTATATATCTTTGAATTCCAATAGCTTTAGTGGGCCGATTCCGAATTCTATTGGTAATCTATCTAAGCTTTATTGGTTAGATTTAGCTGACAATCAGCTTCAGGGTGACATCCCTGTGTCTAATGGCAGCATCCCTGGTCTTGATAACTTAGTCCATGCCAAGCATTTTCATCTTGGGAAGAATAATCTCTCAGGCAATATTCCTCCTCGACTTTTTAGCTCGGAAATGGCTCTGATTCATTTGCTTTTGGAAAGCAATCATCTCACAGGCAAAATTCCATCTACGCTTGGACTGGTTAAGAGCCTGGAGGTGGTGCGCTTGGATAGAAATTCGTTAAGTGAACCTGTGCCTCCAAACATCAACAATCTTACAAATATTCAAGAGCTGTACTTGTCCAACAACAATCTGTCAGGCACCCTGCCAGTTCTTAATGGAATGAATGTCCTAAACTACCTGGATGTGAGCAACAATAGTTTTGAGCCACGGAATTTTCCATTATGGATCACCACTCTTTCTTCTTTAACGACATTAAAGATGGAGAAAACACGGCTTCAAGGACAGGTTCCTGTTTCTTTGTTTAGTATTGTCAGTTTACAGACTGTGGTGTTAAAAAACAACAAAATAAATGGAACCTTGGATGTCGGCTCTGCCTACAGCAACCAGCTGCGACTCATTGATCTGCAATATAATTCAATTGACAATCTTAAGCCAGAAGACGGCCTCTCAAATGTCAGGATAATACTTAAGAATAACCCAATTTGCGAAGAAACTGGAGTTCAAGAGCCCTACTGCTCCAATCTTCAACCTGATGTGTCATATAAAACACCATCAGATAATTGTCAGCCCACTACCTGCAGTTCAGAACAGCTTCCTAGCCCCAACTGTGCATGCGCATATCCATATACGGGAACCTTAATTTTCAGAGCACCTTCCTTTTCGGACCTAGGAAACAAAACTTACTACATACTGCTTGAGGAGGGTCTTATGAAGTCTTTTGAGTCACATCAACTGCCTGTGGATTCAGTTTCATTGAGCCATCCAACTAAGGATCCAAATCAGTATCTGAAATTGAGCTTACAAGTCTTCCCATCAGGGCAAGATTGCTTCAATCGAAAAGGGGTTTCTAGCATTGGTTTTGTGCTAAGCAATCAGACTTTTAAGCCTCCTAAAGTTTTTGGACCATTTTATTTTGATGCAGATAAATATCAACACTTTGGGAGCTCTGAAGGACCTATGGAGTCGAAGAAATCCTCAAACATTGGAATCATAGCTGGAGCAGCAGTTGGTGGTTCTGTCCTGCTACTGTTATTACTCCTAGCAGGTGTTTATGGTTTCCGCCAAAAGCAAAGGGCCGAAGAAGCAATTGGACAAAGCAATCCTTTTAAGCGCTGGGATAAAGTTGACAGCAAGAGTGACATTCCTCAGTTGAAAGAAGCAAGGCGGTTTTCTTTTGAAGAGCTTAAAAAATACACCAGAAACTTTTCTCAAGCCAATGATATTGGATCTGGGGGCTATGGAAAGGTTTACAAGGGAATCCTTCCCAATGGGCAACTGGTAGCAATAAAACGAGCTCAAAAAGAATCAATGCAGGGCAGGCTTGAATTTAAAGCTGAGATTGAGCTCCTATCAAGGGTCCACCACAAGAATCTTGTTAGCCTCGTCGGATTCTGCTTTGACCAAGAAGAACAAATGCTGGTTTATGAGTATGTTCCAAATGGAACATTAAAGGATACTCTCTCAGGGAAATCCGGACTTAGATTGGATTGGATTCGAAGGCTAAAAGTTGCCCTTGGCGCTGCCCGGGGTTTGGCTTATCTTCATGATCTTGCTGATCCTCCAATCATACATAGGGACATCAAATCAAACAATATTTTGCTGGATGAGCGCCTGAATGCAAAAGTTGGTGATTTTGGTCTCTCCAAGTCTGTGGTTGACAGTGAAAAAGATCATGTTACCACTCAAGTTAAAGGAACAATGGGTTACATGGATCCAGAGTATTATATGACTCAACAATTGACTGAGAAGAGTGATGTTTATAGCTTTGGAGTGCTAATGTTGGAACTGATATCTGCAAGAAAGCCAATAGAGCGGGGGAAGTATATTGTGAAAGAGGTTAGGGAGGCAATTGACATGACAAAAGGCTTGTGTGGTCTTCAGGAAATTATTGACCCCACCATTGGTTTAGGTTCCACACTCAATGGTTTTGACAAGTTTGTGGAGTTGGCCATGAATTGTGTTCAAGATTCAGGCGCTGACAGGCCAAAAATGAGCGACGTGGTAAGACAGCTTGAGAACATATTGCAGTTAGCAGGTGGTTCAAACCCCACTATCACTGATGAATCACCAACCGTTTCTTCTAGTTATGAGGAGGTTAGTAGAGGGAGTTCCAGCTGCCATCCTTATAGCAGTGAGTCCTTTGATATAAAAGCGGGACTTCCATATGCAAAAGTGGAGCCTAAGTAA 2877 0.4213 MSERILVALLLVFNCLLIAEGETANEDLVALKSLMDTWKNYPPNWVGSDPCDGWDGIQCEDSRVTSITLPSMGLTGKLSGDIGSLSELESLDLSYNKDLTGSVPKDIGELKKLSTLILVGCSFNGPIPDEIGYLKELRYISLNSNSFSGPIPNSIGNLSKLYWLDLADNQLQGDIPVSNGSIPGLDNLVHAKHFHLGKNNLSGNIPPRLFSSEMALIHLLLESNHLTGKIPSTLGLVKSLEVVRLDRNSLSEPVPPNINNLTNIQELYLSNNNLSGTLPVLNGMNVLNYLDVSNNSFEPRNFPLWITTLSSLTTLKMEKTRLQGQVPVSLFSIVSLQTVVLKNNKINGTLDVGSAYSNQLRLIDLQYNSIDNLKPEDGLSNVRIILKNNPICEETGVQEPYCSNLQPDVSYKTPSDNCQPTTCSSEQLPSPNCACAYPYTGTLIFRAPSFSDLGNKTYYILLEEGLMKSFESHQLPVDSVSLSHPTKDPNQYLKLSLQVFPSGQDCFNRKGVSSIGFVLSNQTFKPPKVFGPFYFDADKYQHFGSSEGPMESKKSSNIGIIAGAAVGGSVLLLLLLLAGVYGFRQKQRAEEAIGQSNPFKRWDKVDSKSDIPQLKEARRFSFEELKKYTRNFSQANDIGSGGYGKVYKGILPNGQLVAIKRAQKESMQGRLEFKAEIELLSRVHHKNLVSLVGFCFDQEEQMLVYEYVPNGTLKDTLSGKSGLRLDWIRRLKVALGAARGLAYLHDLADPPIIHRDIKSNNILLDERLNAKVGDFGLSKSVVDSEKDHVTTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGVLMLELISARKPIERGKYIVKEVREAIDMTKGLCGLQEIIDPTIGLGSTLNGFDKFVELAMNCVQDSGADRPKMSDVVRQLENILQLAGGSNPTITDESPTVSSSYEEVSRGSSSCHPYSSESFDIKAGLPYAKVEPK* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2954 958 SUPERFAMILY Protein kinase-like (PK-like) 618 923 IPR011009 -
Dod05g2954 958 MobiDBLite consensus disorder prediction 909 941 - -
Dod05g2954 958 SMART serkin_6 632 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2954 958 Gene3D Phosphorylase Kinase; domain 1 602 707 - -
Dod05g2954 958 Pfam Protein tyrosine and serine/threonine kinase 635 901 IPR001245 GO:0004672|GO:0006468
Dod05g2954 958 Gene3D Ribonuclease Inhibitor 283 428 IPR032675 -
Dod05g2954 958 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Dod05g2954 958 ProSiteProfiles Protein kinase domain profile. 632 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2954 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Dod05g2954 958 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Dod05g2954 958 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 944 - -
Dod05g2954 958 SUPERFAMILY L domain-like 58 405 - -
Dod05g2954 958 CDD STKc_IRAK 638 904 - -
Dod05g2954 958 Gene3D Transferase(Phosphotransferase) domain 1 708 920 - -
Dod05g2954 958 Gene3D Ribonuclease Inhibitor 181 282 IPR032675 -
Dod05g2954 958 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 944 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2954 Dod-Chr5 55440247 55448288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2954 1 958 Receptor kinase-like Gene Family AT5G49760 56.639 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod05g2954 PK_Tyr_Ser-Thr 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2954 - - gmx:100811702 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2954 05 55440247 55448288 Dod03g1031 03 12504212 12509950 PCT