Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2953 ATGGCAAGTGAACAAGATAATCACAAGCTGAAGCTCTATTCATATTGGAGGAGCTCCTGTTCCTTCCGTGTCCGAATTGCTCTTAACCTCAAAGGCCTAAAATATGCGTACGTGCCAGTCAATTTGCTCAAGGGAGAACAATCTCACCCCGAGTTCCTCGAGCTCAATCCTGTTGGTTTTGTTCCCGTTCTAGTGGATGGCGATCTTGTACTTGCTGACTCCTTAGCCATTATTATGTATTTGGATGATAAGTATCCTCAGCACCCTTTGCTGCCTCATGATATTCACAAAAGAGCAATCAATTTCCAGGTTGCCCATCTAGTTTCTTCATCCATACAACCTCTCCAAAACTTAAGCTTCCTGAATTACATTGGGGAAAAAGTTGGCCCTGATGAAAAACTTCCTTGGGCCCAAAGTGTAATTAGAAAAGGCTTTACAGCTATTGAAAAGCTATTGAAGGACCATACAGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTTTTTGGGACCTCAGATGCATTCAGCATTTGGGAGGTTCAACATTCCCAAGAATGAGTTCCCTATTCTATCAAGATTACATGATACGTATCATGCAATCCCGGCATTCAGGGATGCTTTGCCAGAGAACCAGCCAGATGCGGTACACTAG 660 0.4318 MASEQDNHKLKLYSYWRSSCSFRVRIALNLKGLKYAYVPVNLLKGEQSHPEFLELNPVGFVPVLVDGDLVLADSLAIIMYLDDKYPQHPLLPHDIHKRAINFQVAHLVSSSIQPLQNLSFLNYIGEKVGPDEKLPWAQSVIRKGFTAIEKLLKDHTGRYATGDEVFLADLFLGPQMHSAFGRFNIPKNEFPILSRLHDTYHAIPAFRDALPENQPDAVH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2953 219 Gene3D - 93 219 - -
Dod05g2953 219 CDD GST_N_Zeta 10 82 IPR034333 -
Dod05g2953 219 SUPERFAMILY Thioredoxin-like 5 92 IPR036249 -
Dod05g2953 219 Pfam Glutathione S-transferase, C-terminal domain 133 205 IPR004046 -
Dod05g2953 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 94 219 IPR010987 -
Dod05g2953 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 89 IPR004045 -
Dod05g2953 219 SFLD Glutathione Transferase (cytosolic) 10 199 IPR040079 -
Dod05g2953 219 SFLD Main (cytGST) 10 199 - -
Dod05g2953 219 Gene3D Glutaredoxin 7 92 - -
Dod05g2953 219 Pfam Glutathione S-transferase, N-terminal domain 12 88 IPR004045 -
Dod05g2953 219 PANTHER S-CRYSTALLIN-RELATED 2 216 - -
Dod05g2953 219 PANTHER MALEYLACETOACETATE ISOMERASE 2 216 - -
Dod05g2953 219 CDD GST_C_Zeta 96 214 IPR034330 -
Dod05g2953 219 SUPERFAMILY GST C-terminal domain-like 89 217 IPR036282 -
Dod05g2953 219 TIGRFAM maiA: maleylacetoacetate isomerase 11 217 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2953 Dod-Chr5 55434861 55438298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2953 9 217 Glutathione S-transferase Gene Family AT2G02380 60.766 2.06e-96 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2953 K01800 - gmx:547590 358.607