Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2922 ATGGGGAATGCGAACGGGAATGCTACTACTCCTTCAGAAGAGGAGGAAGACGAAGAAGAACAGGAAGAAGCAGAAGAAGCTTCTTCGGGTACTCTGCCACCAGCACCGCCTGAAATGATGGGTCACTCTCCCCCCACCAGCCCTCGAGCTACCCATTCTCCCTTCCTCTTCACTCCTCAAGTCCCAGTGGTTCCACTACAAAGACCTGATGAGATGCATGTTCCAAGCCATTCCTGGATGCAAACTACTTCAGGGTATGAAAATATGTACTGTGAAGTAGGAATTCCAACAATGATTACTTGGAGTTATGGTGGGAAAGAAGTAGCTGTGGAAGGATCATGGGATAATTGGAAAAGAAGAATACACTTGCAGAGATCAGGGAAAGACTTCGCAATAATGAAGGTACTGCCATCTGGTGTTTACCAGTACAGATTTATTGTGGATGGACGGTGGAGGTATGCTCCAGACTTGCCTTGGGCACAAGATGATGCTGGGAATGCTTACAACATCTTAGACTTACAGGATTATGTCCCCGAGGACATTGGAAGCATTTCTAGTTTTGAACCTCCTCAATCACCAGACTCGAGTTATAATAACTTACAACTTAGTTCTGATGATTATGCAAAGGAGCCACCGTTGGTTCCCCCACACTTGCAAATGACACTGCTAAATGTTCCTGCAATAAATATGGAAATCCAACCTCCTATGTCAAGACCTCAACATGGAGTGCTCAATCATCTTTACATGCAAAAAAGAAAGAGCAGTCCTTCAGTGGTTGCACTGGGCACAACTCATCGGTTTCTAGCCAAATATGTCACTGTGGTGCTGTACAAGTCTTTGCAGAGGTAA 849 0.4523 MGNANGNATTPSEEEEDEEEQEEAEEASSGTLPPAPPEMMGHSPPTSPRATHSPFLFTPQVPVVPLQRPDEMHVPSHSWMQTTSGYENMYCEVGIPTMITWSYGGKEVAVEGSWDNWKRRIHLQRSGKDFAIMKVLPSGVYQYRFIVDGRWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIGSISSFEPPQSPDSSYNNLQLSSDDYAKEPPLVPPHLQMTLLNVPAINMEIQPPMSRPQHGVLNHLYMQKRKSSPSVVALGTTHRFLAKYVTVVLYKSLQR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2922 282 Gene3D - 183 280 - -
Dod05g2922 282 SMART AMPKBI_2 190 280 IPR006828 GO:0005515
Dod05g2922 282 MobiDBLite consensus disorder prediction 11 26 - -
Dod05g2922 282 CDD E_set_AMPKbeta_like_N 96 172 - -
Dod05g2922 282 Pfam Glycogen recognition site of AMP-activated protein kinase 95 174 IPR032640 -
Dod05g2922 282 SUPERFAMILY AMPKBI-like 177 279 IPR037256 -
Dod05g2922 282 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 208 278 IPR006828 GO:0005515
Dod05g2922 282 Gene3D Immunoglobulins 79 177 IPR013783 -
Dod05g2922 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 282 - -
Dod05g2922 282 MobiDBLite consensus disorder prediction 1 55 - -
Dod05g2922 282 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 282 IPR043554 -
Dod05g2922 282 SUPERFAMILY E set domains 95 174 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2922 Dod-Chr5 55158029 55161987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2922 105 175 Protein tyrosine phosphatase (PTP) family AT3G01510 35.616 3.25e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2922 K07199 - gmx:100777497 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2922 05 55158029 55161987 Dod03g0963 03 11755775 11759875 PCT