Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2912 ATGCTTCTTTCTCGCAAGTTATCAAATCCAAGGTATAAAACCAATGGGTTTCTTGATGCCCTTTCCTTCTGTGTTGTGACTATGACTACTGTTGGATATGGAGATCTTGTGCCGAAGAGCTCAACGGAAAAACTACTTGCCGGCTTCTATGTCTTCACTGGCATGGCTCTTGGTGGGTTGATTCTTAGCAAGGCAGCAGATTTCGTTGTCGAGAAGCAGGAAACTTTAATAGTTGGAGCCATAAACAAGGATAGAAAACTTGGTTCTGTAGAGCTACAAAAAGAGTTTCAAAGTAATAAGACCAAATACAAATTCATAGTGGCAGTTGCCACTTTTTTTGTGCTCAAGATAGTAGGGACTATTTTTCTGTATTTTATTGAAAATCTAGATATTGTGGATACCTTCTATTGTGTTTGTTCCGCATTCACTGTTTTGGGTTATGGTGATAAGAGCTTCTCAACTACTATTGGTCGTACTTTTGCTGTTTTCTGGATACTGGGAAGCACCATTTGCTTAGCTCAGTCTTTTGCCTATCTTGTCGAACTATATACTGAAAACAGACAAAGAGGCAAAAATGATCCTTACTCGAAAAATATCACTTCTTGA 606 0.3861 MLLSRKLSNPRYKTNGFLDALSFCVVTMTTVGYGDLVPKSSTEKLLAGFYVFTGMALGGLILSKAADFVVEKQETLIVGAINKDRKLGSVELQKEFQSNKTKYKFIVAVATFFVLKIVGTIFLYFIENLDIVDTFYCVCSAFTVLGYGDKSFSTTIGRTFAVFWILGSTICLAQSFAYLVELYTENRQRGKNDPYSKNITS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2912 201 Gene3D - 88 189 - -
Dod05g2912 201 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 13 189 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod05g2912 201 Pfam Ion channel 112 183 IPR013099 -
Dod05g2912 201 Pfam Ion channel 12 70 IPR013099 -
Dod05g2912 201 SUPERFAMILY Voltage-gated potassium channels 12 74 - -
Dod05g2912 201 PRINTS Two pore domain K+ channel signature 143 152 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod05g2912 201 PRINTS Two pore domain K+ channel signature 26 54 IPR003280 GO:0005267|GO:0016020|GO:0071805
Dod05g2912 201 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 13 189 - -
Dod05g2912 201 SUPERFAMILY Voltage-gated potassium channels 87 185 - -
Dod05g2912 201 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2912 Dod-Chr5 55002147 55002752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2912 12 190 Ion Channels AT5G55630 56.425 4.32e-68 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2912 K05389 - gmx:100799492 254.988