Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2904 ATGTTTCAAAGCAATTTATGCCATGATATCAATGATAGCATCATCCAGGGAACCACTGTTTCTTCTGAATCCTGCAAGGACCAATACTTTACGCTTGAATCGTCCCCAGCAACAACCAATCTCGTAGGTTGTGATTCCCCTTCCTGTGCTAGTGGATTATCATCAAATAGGAGTCCGTTTTCACCACAAGTTTCTCAGTCAGGCTATTCAGATCACTACCCCTCATCGGACAATACACATGGGACACCAATAAGCGGGTACTCGATTGTTGATGATGGGAATGAGTTGAAGCACAAACTTAGAGAACTGGAGGTTTCATTGTTGGGGCCTAATGAATCAGATGTTGCTGACAGTGGAGGATGCTGCATTGAGGGTCGCCTCTACGGAGCATCTCCATCAGTTAAATATGACTGGGATCAGATTGCTCAAATGACTCCAAAGTTTAAGCTGGGAGATGTCCTCATGCTCTGTGCACGAGCCGTGTCTGATGATGATATACCAACAGCAATAGGGTGGATGGATAATGTGTTGGGGAAGATGGTATCAGTTTATGGGGATCCGATCCAGAGGTTGGGTGCTTACTTGTTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAGTCTCATCTACAAATCCTTAAAGTGTGAGCAACCAACAAGCAAAGAGCTAATGAGTTACATGCACATATTGTATCAAATTTGCCCATATTGGAAGTTTGCATACATTTCTGCAAACGCACTCATTGCAGAAGCAATGGCAAATGAATCCAGGATTCACATAATTGATTTCCAAATTGCACAGGGCACACAGTGGCATTTACTTATCCAAGCTCTTGCATGTAGGCCCGGCGGACCTCCATTCATTCGTATAACTGGTGTTGATGATTCCCAATCATTTCATGCTCGGGGTGGAGGACTTGAGATTGTAGGAGAACGGCTCTCAGATTTTGCCAGGTCTTGCAGAGTGCCATTTGAGTTCCATATTGCTGCAATGTCTGGCTCTGAAGTTGAAAGAGCAAACCTTGTGGTTCGACCTGGGGAAGCTTTGGCTGTAAATTTTCCCTATGTCTTGCACCACATGCCAGATGAGAGTGTGAGCACGGAGAACCACAGAGACAGACTGTTGCGATTGGTGAAGAGCTTATCTCCCAAGGTTGTGACCCTTGTTGAGCAAGAATCCAACACCAACACTTCTTCTTTCTTCCACAGGTTTGCCGAGACCCTGGATTATTACACTGCTATGTTTGAATCAATAGATGTAGCTTGCCCCAGAGATGACAAGAAGCGGGTCAATGCAGAGCAGCATTGTGTGGCACGGGACATTGTCAACATGATAGCTTGCGAAGGGGTTGAGAGGGTGGAAAGGCATGAGCTTCTAGGGAAGTGGAGGTCAAGATTTTCTATGGCTGGATTTAAGCAAATCCCATTGAGTTCTTCAGTGATGGTTGCTGCCCGAAATCTATTGAAGGAATTCAATGAAAACTACAGGCTTGCATATAGGGATGGTGCTTTGTATCTTGGCTGGATGAGGAGAGCCTTGGCCACCTCTTCTGCTTGGAGGTGA 1566 0.4566 MFQSNLCHDINDSIIQGTTVSSESCKDQYFTLESSPATTNLVGCDSPSCASGLSSNRSPFSPQVSQSGYSDHYPSSDNTHGTPISGYSIVDDGNELKHKLRELEVSLLGPNESDVADSGGCCIEGRLYGASPSVKYDWDQIAQMTPKFKLGDVLMLCARAVSDDDIPTAIGWMDNVLGKMVSVYGDPIQRLGAYLLEGLRARLESSGSLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYISANALIAEAMANESRIHIIDFQIAQGTQWHLLIQALACRPGGPPFIRITGVDDSQSFHARGGGLEIVGERLSDFARSCRVPFEFHIAAMSGSEVERANLVVRPGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSSFFHRFAETLDYYTAMFESIDVACPRDDKKRVNAEQHCVARDIVNMIACEGVERVERHELLGKWRSRFSMAGFKQIPLSSSVMVAARNLLKEFNENYRLAYRDGALYLGWMRRALATSSAWR* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2904 521 MobiDBLite consensus disorder prediction 55 87 - -
Dod05g2904 521 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 1 520 - -
Dod05g2904 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 520 IPR005202 -
Dod05g2904 521 Pfam GRAS domain family 152 521 IPR005202 -
Dod05g2904 521 MobiDBLite consensus disorder prediction 55 85 - -
Dod05g2904 521 ProSiteProfiles GRAS family profile. 141 521 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2904 Dod-Chr5 54937207 54940659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2904 26 521 GRAS Transcription Factor Family AT4G17230 62.325 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dod05g2904 GRAS 2.2e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2904 - - aip:107636708 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2904 05 54937207 54940659 Dod03g0937 03 11501479 11504121 PCT