Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2876 ATGAAGCTGGACAACTCCAACGGCCAGATTTGCGCAGCCAGCAGAGACGCCGATGACGCCGACGCCGGCGCCGACGAGATATTCGTGCCGCCGCTCAACTTCGCCATGGTCGACCACGGCATTTTTAGGTCTGGTTTCCCTGATTCTGCCAACTTCGGATTCTTGAAATCCCTCCGTCTCCGTTGCGTCATATGTTTGTGCCCTGAACCGTATCCAGAAGCGACATCGGAGTTTTTGAATGCCAACGGAATAAGGCTTTATCAATTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAGATGATACAATTCGTGAAGCTTTGAAAGTAGTCCTAGATGTCAGGAACCACCCCCTACTGATTCATTGTAAGCGAGGGAAGCACCGGACTGGTTGCCTTGTGGGATGCGTAAGAAGATTGCAGAGATGGTGCCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCTGGCGCCAAGGCCAGAGTGTCAGATCAGAGGTTCATCGAATTGTTTGATATCTCTTGTTTCAAGCACCTCCCGCTGTCATTTTCATGCTCCAGGAGATAG 573 0.5026 MKLDNSNGQICAASRDADDADAGADEIFVPPLNFAMVDHGIFRSGFPDSANFGFLKSLRLRCVICLCPEPYPEATSEFLNANGIRLYQFGIDGCKEPFVNIPDDTIREALKVVLDVRNHPLLIHCKRGKHRTGCLVGCVRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCFKHLPLSFSCSRR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2876 190 Gene3D Protein tyrosine phosphatase superfamily 27 177 IPR029021 -
Dod05g2876 190 ProSitePatterns Tyrosine specific protein phosphatases active site. 123 133 IPR016130 GO:0016311|GO:0016791
Dod05g2876 190 ProSiteProfiles Dual specificity protein phosphatase domain profile. 33 187 IPR020422 GO:0006470|GO:0008138
Dod05g2876 190 PANTHER - 15 189 - -
Dod05g2876 190 PANTHER TYROSINE-PROTEIN PHOSPHATASE 15 189 - -
Dod05g2876 190 Pfam Tyrosine phosphatase family 29 180 IPR004861 -
Dod05g2876 190 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 28 175 IPR029021 -
Dod05g2876 190 PRINTS Plant and fungal dual specificity phosphatase signature 65 78 IPR020428 GO:0016791
Dod05g2876 190 PRINTS Plant and fungal dual specificity phosphatase signature 101 115 IPR020428 GO:0016791
Dod05g2876 190 PRINTS Plant and fungal dual specificity phosphatase signature 28 45 IPR020428 GO:0016791
Dod05g2876 190 PRINTS Plant and fungal dual specificity phosphatase signature 84 98 IPR020428 GO:0016791
Dod05g2876 190 CDD PFA-DSP_Siw14 28 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2876 Dod-Chr5 54684890 54688573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2876 1 190 Protein tyrosine phosphatase (PTP) family AT4G03960 66.492 8.41e-98 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2876 K18045 - gmx:100785520 335.109