Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2873 ATGAAAGCCTCAAAGCAACAACAGAAGCAGCAGCACCAGGTCCAACAGAGAGGATGCAGGGCCTTGTGCTGCAGCTGCAGGCTTAGTGTCTCATCCACAGAGGAAGCAGAGAGCTCTGCCTCTGATAGGTTCCCTTCAGTTTCGAGCCTAGCACATGCCATGGTGCAAGAGAGACTTGACCAGATGATTAGGGAAAAGATGGAAGCCAGACATGCAGACAAAAGAAGGCAGCGCAGCAGAGAAGAAGGGACTAAGTTTGTTGTAATGGTAGCAATGGAGAAGTGCTCTTATGATCCAAGAGAGGATTTTAGGGAGTCCATGATGGAGATGATAACTGCTAACCGCCTTCAAGATGCCAAAGATCTTCGTAGTCTGTTGAACTATTACATCTCCATGAACTCCAACCAGTACCAGAGTCTTATACTCGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAAATGCCACTGGTAA 483 0.4596 MKASKQQQKQQHQVQQRGCRALCCSCRLSVSSTEEAESSASDRFPSVSSLAHAMVQERLDQMIREKMEARHADKRRQRSREEGTKFVVMVAMEKCSYDPREDFRESMMEMITANRLQDAKDLRSLLNYYISMNSNQYQSLILEVFHEVCTNLFLSCKCHW* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2873 160 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 90 153 IPR006458 -
Dod05g2873 160 PANTHER TRANSCRIPTION REPRESSOR-RELATED 13 154 - -
Dod05g2873 160 Pfam Transcriptional repressor, ovate 96 153 IPR006458 -
Dod05g2873 160 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 13 154 IPR038933 GO:0045892
Dod05g2873 160 ProSiteProfiles OVATE domain profile. 92 151 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2873 Dod-Chr5 54645685 54646209 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod05g2873 Ovate 7.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2873 - - var:108330150 258.84