Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2865 ATGGCTCACACCGACTTCCCTTTTTCACTCCTTTTCATCTTTGTTTCTCTTCCTCTTGCTCTCGCCACCACTGACCCTTCTGATGTTCAAGCACTTGAGACCATGTACAACGCGTTAAATACTCCATCTGGCCTAACGGGTTGGAAGATCGTAGGTGGTGATCCCTGTGGAGAGTCATGGAAAGGGGTAACATGTGATGGTTCAGCCGTTGTTTCCATTGAGCTCTCAGGTTTGGGACTCAATGGGACTATGGGATATCAGCTTTCTGACCTCATGTCACTGAAAAAGCTTGACTTGAGTGACAACAATATCCACGACACAATTCCCTACCAATTGCCATCGAATCTTACAAGCTTGAGTCTTGCAAGGAATAACTTAAGCGGAGCTCTTCCTTTTTCAATTTCTGCCATGGTTTCCCTCAATTATCTGAATGTAAGCCAAAATGTACTCTCCCAATCAATTGGAGACATTTTTGCTGGTCTTGCCGGTCTTGGTACCCTGGATCTATCATTCAATAACTTTTCTGGGGATCTTCCCGGTTCATTTGGTTCATTGTCCAATCTTTCTTCTCTGTCCTTGCAGAACAATCAGTTGACTGGTTCTCTTAGTGCTCTTGTTGGTTTGCCTTTGGACTCTTTAAATGTGGCGAACAATCATTTCAATGGATCAGTACCGCATGAGCTTGGTTCAATCCATAATTTCATATATGAGGGAAATTCTTTTGACAATGGTCCTGCTCGTCTTCCGCCACCCTTTACAGCACCTCAGCCCAGAAGATCTCATTATAATAATAACCATGATTATGGATATGATTCACATAGTAAAAAAACCCAGGGTTCTGATATTGAAAATTCTGATGGCCATGAGGGTTTGACCACTGGAGTCATTGGAGGAATTATCTTAGGCTCAGTGTTTGTTGCTGTTACTGTGGTACTTGCTCTTGTTTTCGGTATGCGAAAGCCAAAAAGGAAGGAGAAAGGTTCAAGAACATCTAATGGGAGTCTTCCTCTTGAAATTATTACTGTAACTCCTCAGATGGAAGAACAGGTGGTAAAAAGTGCTACTGTAATTGCGGATCTGAAACCTCCCCCTTCAGACAAAATGATGGTTGAGAGGATACCTGCAAAAAATGGATCTTCAAGGCAGGTGAAGTCCCCAATAACTGCTACATCATACACAATTGCTTCCCTCCAGAGTGCAACAAATAGCTTCAGTCAGGAGTTTCTCATTGGTGAAGGTTCTCTTGGTCGAGTTTATAAGGCTGACTTCCCAAATGGAAAGATCATGGCCATTAAGAAAGTAGACAATGCAGCACTGTCATTACAGGAGGAAGATGTCTTTCTTGAAGTTGTTTCAAATATGGCACTCTTGCGGCACCCAAACATTGTTACACTAGCGGGATATTGTGCAGAGCATGGGCAGCGTCTTCTAGTATATGAGTATATAAGAAATGGAAATCTGCACGATGCGCTCCACTATGCTGAAGATAGCAGTAAACCCTTATCTTGGAACGCCCGTGTACGCATAGCACTTGGCACCGCTCGAGCTTTGGAGTACTTGCATGAAGTGTGCATGCCTTTTGTTGTACACAGAAATTTCAAATCAGCAAATATATTACTTGATGAGGAGCTCAATCCCCACCTGTCTGACTGTGGTTTAGCTGCTCTAACACTAAGTACTGAGCGACAGGTTCCAGCTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAATATACACTGTAAAAAGTGATGTATACAGCTTTGGGGTGGTCATGTTGGAGCTATTGACTGGTCGCAAGCCACTTGACAGTTCACGAGTAAGATCAGAGCAGTCACTTGTGAGGTGGGCTACTCCTCAGCTTCATGATATAGATGCCTTAGCCAAAATGGTTGATCCCGCTTTGAATGGCATGTATCCGGCAAAGTCACTCTCACGCTTTGCTGATATCATTGCCCTTTGTGTTCAGCCTGAACCTGAATTTCGACCTCCTATGTCTGAGGTGGTGCAAGCATTGGTAAGGTTGGTGCAAAGAGCAAGTATGGTTCAGCGGCGTCCCAGTGATGAATCTAGTTTTGGTCACAAGACCCCAGATCATGAGGCCATAGACCTGCCATTTTAG 2139 0.4385 MAHTDFPFSLLFIFVSLPLALATTDPSDVQALETMYNALNTPSGLTGWKIVGGDPCGESWKGVTCDGSAVVSIELSGLGLNGTMGYQLSDLMSLKKLDLSDNNIHDTIPYQLPSNLTSLSLARNNLSGALPFSISAMVSLNYLNVSQNVLSQSIGDIFAGLAGLGTLDLSFNNFSGDLPGSFGSLSNLSSLSLQNNQLTGSLSALVGLPLDSLNVANNHFNGSVPHELGSIHNFIYEGNSFDNGPARLPPPFTAPQPRRSHYNNNHDYGYDSHSKKTQGSDIENSDGHEGLTTGVIGGIILGSVFVAVTVVLALVFGMRKPKRKEKGSRTSNGSLPLEIITVTPQMEEQVVKSATVIADLKPPPSDKMMVERIPAKNGSSRQVKSPITATSYTIASLQSATNSFSQEFLIGEGSLGRVYKADFPNGKIMAIKKVDNAALSLQEEDVFLEVVSNMALLRHPNIVTLAGYCAEHGQRLLVYEYIRNGNLHDALHYAEDSSKPLSWNARVRIALGTARALEYLHEVCMPFVVHRNFKSANILLDEELNPHLSDCGLAALTLSTERQVPAQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASMVQRRPSDESSFGHKTPDHEAIDLPF* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2865 712 CDD STKc_IRAK 410 681 - -
Dod05g2865 712 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Dod05g2865 712 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 8 22 708 - -
Dod05g2865 712 PANTHER OS01G0253100 PROTEIN 22 708 IPR045271 GO:0004714|GO:0006468
Dod05g2865 712 Pfam Protein kinase domain 407 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2865 712 SUPERFAMILY L domain-like 23 233 - -
Dod05g2865 712 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Dod05g2865 712 ProSiteProfiles Protein kinase domain profile. 404 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2865 712 MobiDBLite consensus disorder prediction 246 286 - -
Dod05g2865 712 Gene3D Phosphorylase Kinase; domain 1 367 481 - -
Dod05g2865 712 SMART LRR_typ_2 137 160 IPR003591 -
Dod05g2865 712 SMART LRR_typ_2 161 184 IPR003591 -
Dod05g2865 712 SMART LRR_typ_2 91 115 IPR003591 -
Dod05g2865 712 SMART LRR_typ_2 185 208 IPR003591 -
Dod05g2865 712 Gene3D Ribonuclease Inhibitor 25 252 IPR032675 -
Dod05g2865 712 MobiDBLite consensus disorder prediction 690 712 - -
Dod05g2865 712 SUPERFAMILY Protein kinase-like (PK-like) 382 678 IPR011009 -
Dod05g2865 712 MobiDBLite consensus disorder prediction 264 283 - -
Dod05g2865 712 Gene3D Transferase(Phosphotransferase) domain 1 482 691 - -
Dod05g2865 712 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Dod05g2865 712 MobiDBLite consensus disorder prediction 694 712 - -
Dod05g2865 712 Pfam Leucine rich repeat 114 174 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2865 Dod-Chr5 54568485 54574667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2865 137 712 Strubbelig Receptor Gene Family AT4G22130 68.858 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Dod05g2865 Pkinase 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2865 - - gmx:100781455 1077.39