Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2854 ATGGACAAAGCGGGCTGGGGTCTCACCCTTGATTCATCTTCCTCCACCCTCTCATCATCATTCTCTCCTAACTCCGTGATCAAATCTTTCCCTAATCGTCTCAGCCATCATCACAGTCACAGGATGTTCCCAGTTTTAGGAGGATTTCCCGTGAACCTCATCAGCCGCACTGCTGATCCCAGCTCCCCACCGTCTGATCAAAATAACAATCGAGCGGTTGTCGTCGGCGAAGTGGACTTCTTCTCTGATAGAAACAAGCCATCATCACCTGCACTTGATGACCACGATGGCGATGACGCTGATCATCATCCTCAACATGTCAAACCATCCATCAAGGAGCAGATTTCTCGTGATGGAAGCCCTCCCAAGTGTAGTCTCCATGTTAATACTGGTTTGCAACTTCTTACTGCTAATACTGGAAGTGATCAATCTACCGTTGATGATGGGATTTCGTCAGATGCTGAAGATAGGCGTGCCAAGACCATTGAGCTGGCTCAACTGCAAGAAGAACTTCAACGCCTGAATGCAGAGAACCAAAAGCTGAAGGAGATGCTCACCCATGTGAGCAGTGACTACGCGAGCTTGCAAATGCAACTTATGGCATTAATGCAACAACAAAAGAACCAACACATCACCGAGAGCACAGAACACGAGGTTGCACAAGGGGCTGGTGCAGAAATGGTGCCAAGACAGTTCCTTGATTTAGTCCGTTTTGGTACAGCCGAAGGAGATGATCAAGTATCCAATGCTTCTTCGGATGAAAGAACTCGATCAAACACGCCTCAAAACCAAAACATTGATGTGGGAGCAAAGGATTACGTCACAAACAATATTGGCAAGAATGAGCTAGATGGGAAGGAGACTCCGTACGACTCAGAATCACAAGGTTGGGACCAGAACAAGCTTCAGAAACTGAACCCCTCTAACCCTGCTGAACAATCAACCCCAGAAGCCGCTATGCGAAAAGCTCGTGTCTCAGTCCGTGCCCGATCAGAAGCTCCCATGATTAGTGATGGGTGTCAATGGCGAAAATATGGACAGAAAATGGCTAAGGGGAACCCATGTCCTCGAGCATATTACAGATGCACTATGGCAGTTGGCTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGATAGAGCAATCTTGACAACAACATATGAAGGGACGCATAACCATCCACTGCCACCTGCGGCGATGGCAATGGCATCGACCACCGCAGCTGCTGCAAGCATGTTGCTGTCTGGGTCAATGACAAGTGCTGATGGGATTATGAACCCCAATTTGCTAGCCAGAGCCATTCTTCCCTCTTCAAGCATGGCGACACTCTCAGCCTCAGCGCCATTCCCAACCGTGACATTGGACCTCACACACAACCCAAACGCGTTGCAGTACCAAAGGCCTCCTAACGCCCCACTCCTCCAGCCCCACGCGCAGCTGCCGCAGGTGATTGCACACGCGCTCTATAACCAGTCCAAATTCTCTGGGCTTCACTCGTCTCAGGACGCGGGGTCTTCTCAAGCTCCGAGGCCAGAGTTGCACCCAGCCCAACAGCCCTCGCTCGCCGACAAGGTCAGTGCCATCACCTCCGACCCGAACTTCACGGCGGTGCTCGTAGCCGCCATTTCCTCCATCATCGGCGGAGCTCATCCAAACAACAACAGCGACAACAAGGACGGTAATCCCAATATCATCAACAGTGCTACAATCAGCAGTTTTTCTGGAAATTAG 1734 0.5052 MDKAGWGLTLDSSSSTLSSSFSPNSVIKSFPNRLSHHHSHRMFPVLGGFPVNLISRTADPSSPPSDQNNNRAVVVGEVDFFSDRNKPSSPALDDHDGDDADHHPQHVKPSIKEQISRDGSPPKCSLHVNTGLQLLTANTGSDQSTVDDGISSDAEDRRAKTIELAQLQEELQRLNAENQKLKEMLTHVSSDYASLQMQLMALMQQQKNQHITESTEHEVAQGAGAEMVPRQFLDLVRFGTAEGDDQVSNASSDERTRSNTPQNQNIDVGAKDYVTNNIGKNELDGKETPYDSESQGWDQNKLQKLNPSNPAEQSTPEAAMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRAILTTTYEGTHNHPLPPAAMAMASTTAAAASMLLSGSMTSADGIMNPNLLARAILPSSSMATLSASAPFPTVTLDLTHNPNALQYQRPPNAPLLQPHAQLPQVIAHALYNQSKFSGLHSSQDAGSSQAPRPELHPAQQPSLADKVSAITSDPNFTAVLVAAISSIIGGAHPNNNSDNKDGNPNIINSATISSFSGN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2854 577 MobiDBLite consensus disorder prediction 82 124 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 292 315 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 243 319 - -
Dod05g2854 577 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 66 559 IPR044810 GO:0003700
Dod05g2854 577 Coils Coil 157 191 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 553 577 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 497 523 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 1 23 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 244 271 - -
Dod05g2854 577 Pfam WRKY DNA -binding domain 338 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2854 577 MobiDBLite consensus disorder prediction 8 23 - -
Dod05g2854 577 SMART WRKY_cls 336 396 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2854 577 ProSiteProfiles WRKY domain profile. 331 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod05g2854 577 PANTHER WRKY TRANSCRIPTION FACTOR 6 66 559 - -
Dod05g2854 577 Gene3D WRKY domain 321 398 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod05g2854 577 MobiDBLite consensus disorder prediction 497 514 - -
Dod05g2854 577 MobiDBLite consensus disorder prediction 88 113 - -
Dod05g2854 577 SUPERFAMILY WRKY DNA-binding domain 329 397 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2854 Dod-Chr5 54475262 54478449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2854 1 560 WRKY Transcription Factor Family AT1G62300 48.693 1.25e-144 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod05g2854 WRKY 4.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2854 - - gmx:100802124 654.44