Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2852 ATGGAGTGGACTAGGGGCCACACCCTCGGACGGGGCTCCATCGCCGAGTCCCACTGCTCCGGCGATGTTTTCGCGGTGAAGACAGCCCAGCTCCACCACTCAGAGTCGCTGAAGAGGGAGCAGGGGATTCTTTCCACTCTAAACTGTCCTCAAATTGTGGCTTACAAAGGTTGTGACGTCACGCTAGAGAACGGTGCGCTCCTCTACAACGTGTTCATGGAATACGCTCCTCACGGGACCCTCGCCGACGCTGCTCGGAGGCACAAGGGTGGCATGCGCGAGCCTCTGGTGTGTTGCTACACGCGCCAAATCCTGCATGGTCTTAACTACCTTCATTCCAAGGGAATAGTGCATTGCGACCTGAAGGGGCAGAACGTGTTGGTGACGGAGCAAGGTGCTAAGATCGCCGATTTTGGTTGCGCTCGGAGGGTGGCAGATTCATGCGGCGGCGTGATTGCGGGGACGCCGGCTTTCATGGCGCCTGAGGTGGTGCGTGGGGAGCAGCAGGGCTTCCCTGCTGACGTGTGGGCAGTGGGGTGCACCGTGTTGGAGATGATGACAGGGGAAGCGCCGTGGCGCGACGTGGATGACCCTGTTACGGCGCTTTATGGGATTGTTTTCTCTGGCGAGGTGCCGGAGATTCCGAGTTACGTGTCGGAGGAAGGGAAGGATTTCTTGGGGAAGTGTTTGAAGAGGGACCCTTCTGAGAGGTGGTCTGTGAGGGAGCTTCTTGGACATGGATTTGTTGGGCGTCGAGTAATTTGGTGTCGTTGGAGAAGTTTGAATTTGCATTGGGTATGTGCGATTTTGATACTCCCACGGGTGTGTTGGATCGTGGATTTTGGGATAAATCAGTGGAGACAGATCAGAAGGACCAGACAGCGACACGTGAGTGTTGTTCCTGGAATTCTGCAGGTCCTAGAGATAGAATTCGTGGGTTGTGTGGAGATCAAGGTATGA 960 0.5583 MEWTRGHTLGRGSIAESHCSGDVFAVKTAQLHHSESLKREQGILSTLNCPQIVAYKGCDVTLENGALLYNVFMEYAPHGTLADAARRHKGGMREPLVCCYTRQILHGLNYLHSKGIVHCDLKGQNVLVTEQGAKIADFGCARRVADSCGGVIAGTPAFMAPEVVRGEQQGFPADVWAVGCTVLEMMTGEAPWRDVDDPVTALYGIVFSGEVPEIPSYVSEEGKDFLGKCLKRDPSERWSVRELLGHGFVGRRVIWCRWRSLNLHWVCAILILPRVCWIVDFGINQWRQIRRTRQRHVSVVPGILQVLEIEFVGCVEIKV* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2852 319 ProSiteProfiles Protein kinase domain profile. 1 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2852 319 SUPERFAMILY Protein kinase-like (PK-like) 3 274 IPR011009 -
Dod05g2852 319 PANTHER MAP KINASE KINASE KINASE 1 252 - -
Dod05g2852 319 Gene3D Transferase(Phosphotransferase) domain 1 2 259 - -
Dod05g2852 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Dod05g2852 319 SMART serkin_6 3 249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2852 319 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 252 - -
Dod05g2852 319 CDD STKc_MAPKKK 2 249 - -
Dod05g2852 319 Pfam Protein kinase domain 7 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2852 Dod-Chr5 54452731 54454141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2852 1 249 MAP Kinase Kinase Kinase AT2G32510 54.054 1.56e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Dod05g2852 Pkinase 5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2852 K20716 - gmx:100802174 372.859