Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2842 ATGATTTTATTGTCAGATTATGGAGTGACCTCATATGACATTGGAGATGGTTTTGGACATTTTGCAATTGCAACTCAAGATGTTTATAAATTGGCTGAACACATCCGGGCCAATGGTGGAAACATCACAAGGGAGCCTGGTCCAGTTCAGGGAGGGAATTTAGTCATTGCCTTTCTGAATGATCCTGATGGTTACCGTTTTGCTCTCATCCAAAGACCTACAATCCATGACCCATTGTGTCAAGTGATGCTTCGTGTTGGTGATTTGGACCGCTCAATTAAGTTTTATGAAAAGGCCTTGGGCTTGAAGTTGTTGAGGAAGGTTGACAAGCCTGAGTACAAGTACACTGCAGCTCTCCTTGGGTATGGAGAGGAGCAGGAGACAACTGTGTTGGAGTTGACATATAACTATGGTGTCACTGAATACTCCAAGGGCAATGCTTATGCACAGATTGCTATTGGTACTGATGACGTATATAAGAGCGCTGAAGCAGTTAACATAGTTACACAAGAGCTTGGAGGGAAGATTACTCGGCCACCGGGGCCAATTCCTGGCATTAACACGAAAATTACTTCTTTCTTAGATCCAGATGGCTGGAAAACTGTAAGTTTTTTTTTTTTTTTTTCCCTTTTCAGTCCTTATATTGAACTATAG 654 0.4205 MILLSDYGVTSYDIGDGFGHFAIATQDVYKLAEHIRANGGNITREPGPVQGGNLVIAFLNDPDGYRFALIQRPTIHDPLCQVMLRVGDLDRSIKFYEKALGLKLLRKVDKPEYKYTAALLGYGEEQETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEAVNIVTQELGGKITRPPGPIPGINTKITSFLDPDGWKTVSFFFFFSLFSPYIEL* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2842 217 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 202 - -
Dod05g2842 217 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 78 206 IPR037523 -
Dod05g2842 217 PANTHER LACTOYLGLUTATHIONE LYASE 4 202 - -
Dod05g2842 217 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 9 76 IPR029068 -
Dod05g2842 217 ProSitePatterns Glyoxalase I signature 1. 81 102 IPR018146 GO:0004462|GO:0046872
Dod05g2842 217 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 1 72 IPR037523 -
Dod05g2842 217 TIGRFAM glyox_I: lactoylglutathione lyase 79 200 IPR004361 GO:0004462|GO:0046872
Dod05g2842 217 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 199 IPR004360 -
Dod05g2842 217 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 68 IPR004360 -
Dod05g2842 217 Gene3D - 75 204 IPR029068 -
Dod05g2842 217 Gene3D - 1 72 IPR029068 -
Dod05g2842 217 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 79 200 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2842 Dod-Chr5 54363440 54366370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2842 81 199 Calmodulin-binding Proteins AT1G08110 30.556 3.84e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2842 K01759 - gmx:100793089 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2842 05 54363440 54366370 Dod03g0853 03 10570576 10574212 PCT