Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2826 ATGTACAATGGTGTTATTAAGAAACTAAGATTATGTTTCTTTGCAGAGACTGAAAAGGGAATATTTGATGCCATATTGGAAGGTGAGATTGACTTTGTAAGTGAACCATGGCCCTCAATATCAGACAGTGCTAAAGATCTAGTCAAGAAGATGTTGACACAGGATCCAAAGAAGCGTATCACTTCTGCTCAAGTCCTTGAACACCCTTGGCTCAGAGAAGGTGGAGAGGCATCTGATAAACCAATTGATAGTGCAGTTCTGTCTAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTTGCATTGAAGGTGATTGCTGAAAATCTGTCAGAAGAAGAGATTAAAGGTCTCAAAGCAATGTTTGCAAATATGGACACCGACAACAGTGGAACCATCACCTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGATCGCAACTGTCAGAGGCTGAAGTGAAGCAAATCATGGAAGCTGCTGATGTTGACGGGAATGGGTCGATTGACTACATTGAATTCATCTCAGCTACAATGCATAGGCACAGACTTGAAAGGGATGAACACCTTTACAAAGCATTCCAGTATTTTGACAAGGATAACAGTGGGTATATTACTAGAGATGAATTGGAGAGTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACAATAAAGGAGATAATATCTGAGGTGGATACAGATAATGATGGAAGAATAAACTATGAGGAGTTCTGTGCAATGATGAGAAGTGGAATGCCACAATAG 771 0.406 MYNGVIKKLRLCFFAETEKGIFDAILEGEIDFVSEPWPSISDSAKDLVKKMLTQDPKKRITSAQVLEHPWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDNSGTITYEELKTGLARIGSQLSEAEVKQIMEAADVDGNGSIDYIEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELESAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPQ* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2826 256 SUPERFAMILY EF-hand 110 250 IPR011992 -
Dod05g2826 256 SUPERFAMILY Protein kinase-like (PK-like) 10 93 IPR011009 -
Dod05g2826 256 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Dod05g2826 256 SMART efh_1 118 146 IPR002048 GO:0005509
Dod05g2826 256 SMART efh_1 154 182 IPR002048 GO:0005509
Dod05g2826 256 SMART efh_1 190 218 IPR002048 GO:0005509
Dod05g2826 256 SMART efh_1 225 253 IPR002048 GO:0005509
Dod05g2826 256 Pfam Protein kinase domain 25 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2826 256 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 254 - -
Dod05g2826 256 Gene3D - 78 252 - -
Dod05g2826 256 ProSiteProfiles EF-hand calcium-binding domain profile. 222 256 IPR002048 GO:0005509
Dod05g2826 256 ProSitePatterns EF-hand calcium-binding domain. 234 246 IPR018247 -
Dod05g2826 256 ProSiteProfiles Protein kinase domain profile. 1 71 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2826 256 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 13 254 - -
Dod05g2826 256 ProSitePatterns EF-hand calcium-binding domain. 127 139 IPR018247 -
Dod05g2826 256 ProSiteProfiles EF-hand calcium-binding domain profile. 186 221 IPR002048 GO:0005509
Dod05g2826 256 Gene3D Transferase(Phosphotransferase) domain 1 13 71 - -
Dod05g2826 256 ProSiteProfiles EF-hand calcium-binding domain profile. 150 185 IPR002048 GO:0005509
Dod05g2826 256 ProSiteProfiles EF-hand calcium-binding domain profile. 114 149 IPR002048 GO:0005509
Dod05g2826 256 Pfam EF-hand domain pair 189 251 IPR002048 GO:0005509
Dod05g2826 256 Pfam EF-hand domain pair 119 179 IPR002048 GO:0005509
Dod05g2826 256 ProSitePatterns EF-hand calcium-binding domain. 163 175 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2826 Dod-Chr5 54248890 54251509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2826 13 256 EF-hand Containing Proteins AT3G20410 82.787 1.50e-151 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod05g2826 EF-hand_7 1.2e-16 CL0220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2826 K13412 - gmx:100816859 466.848