Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2824 ATGGGTTGTCACAGTAGCAAGGAGAAGAAACCAAGGCAGGGACTTGGTGGCCATGGATCAAACAACACACGCGCTGTTGAAACCCATCAAAGCTATCACACTGTTCAGCCACCTTCTACTACTCAGCAGGTTCATACAGAGACACCACCACCCAAGCCACGGCAACAGCCACAGCCACAGCCACAGCCACAGCCACAGTCGCAGGCTCCAATTGTGACCCAACCAAAACCCTCTCCTCCTCAGAATGCGAGGGCAGTGCAGAAAACTGAAGCAAACACCATTCTGGGAAAACCCTTTGAAGATATCAAGAAGCACTACACTCTTGGGAAAGAACTGGGAAGAGGGCAATTTGGGATTACTTATCTGTGCACTGAGAATTCCAGTGGGCAAAGCTATGCTTGCAAATCCATATTGAAGAGGAAGCTTGTGTCCAAAGCTGACAGAGAAGACATGAAGAGGGAGATTCAGATGATGCAGCATTTGTCTGGGCAACCAAACATTGTGGAATTCAAGGGTGCTTTTGAGGACAGGTACTCTGTGCACCTTGTGATGGAACTCTGTGCTGGCGGGGAGCTATTTGATAGAATCATTGCGGAGGGTCACTATTCAGAGAGAGCAGCTGCATCGATTTGCAGAGCCATTGTGAATGTGGTGCACATTTGCCACTTTTATGGGGGTCATGCACAGGGATCTCAAGCCTGA 702 0.4915 MGCHSSKEKKPRQGLGGHGSNNTRAVETHQSYHTVQPPSTTQQVHTETPPPKPRQQPQPQPQPQPQSQAPIVTQPKPSPPQNARAVQKTEANTILGKPFEDIKKHYTLGKELGRGQFGITYLCTENSSGQSYACKSILKRKLVSKADREDMKREIQMMQHLSGQPNIVEFKGAFEDRYSVHLVMELCAGGELFDRIIAEGHYSERAAASICRAIVNVVHICHFYGGHAQGSQA* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2824 233 Gene3D Phosphorylase Kinase; domain 1 110 186 - -
Dod05g2824 233 SUPERFAMILY Protein kinase-like (PK-like) 103 223 IPR011009 -
Dod05g2824 233 MobiDBLite consensus disorder prediction 16 49 - -
Dod05g2824 233 ProSiteProfiles Protein kinase domain profile. 106 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2824 233 ProSitePatterns Protein kinases ATP-binding region signature. 112 139 IPR017441 GO:0005524
Dod05g2824 233 Pfam Protein kinase domain 106 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2824 233 MobiDBLite consensus disorder prediction 1 86 - -
Dod05g2824 233 SMART serkin_6 106 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2824 233 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 64 225 - -
Dod05g2824 233 MobiDBLite consensus disorder prediction 50 77 - -
Dod05g2824 233 Gene3D Transferase(Phosphotransferase) domain 1 148 222 - -
Dod05g2824 233 PANTHER SERINE/THREONINE-PROTEIN KINASE 64 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2824 Dod-Chr5 54247631 54248332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2824 1 225 EF-hand Containing Proteins AT4G04720 60.444 9.25e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod05g2824 Pkinase 7.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2824 K13412 - jre:108982097 279.256