Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2793 ATGACAACCTCATCAGCTATCCATCAATATGATGAAACCATGAAGAAACAACTAGCATCACTTCTGCGGGTTATGAGTTTAGTTAAATCCTTCAAAGAAGATAATACTCCTTGCGAAATTGATGAGGGTCTCTTTTTGGGTTCTGTTGGTACTGCAAACAACAAGGATGCATTGAAAAGCTTGAATATTACTCACATTTTGACTGTGGCTGGTAAACTGCCACCTGCACATCCTGGGGATTTTGTGTATAAAATTATAGACGTTATTGACAGAGAAGATGTCAACTTAAAACAATACTTCGATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACAAGGAGGAGGTGTTTTGGTTCATTGTTTTGCTGGAAAATCAAGGAGTGTGACTGTTGTTGTTGCATATTTGATGAAGACTCGCGGAATGAGCCTGTCTGAAGCTCTGCAACATGTAAAGAGCAAACGACCACAGGCAGCTCCGAATCCTGGTTTCATTCGTCAGCTGGAAGACTTTGAAAGATCACTTCAAGGTCCCTATAGTTTCTACTACTCTTAG 555 0.3964 MTTSSAIHQYDETMKKQLASLLRVMSLVKSFKEDNTPCEIDEGLFLGSVGTANNKDALKSLNITHILTVAGKLPPAHPGDFVYKIIDVIDREDVNLKQYFDECFDFIDEAKRQGGGVLVHCFAGKSRSVTVVVAYLMKTRGMSLSEALQHVKSKRPQAAPNPGFIRQLEDFERSLQGPYSFYYS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2793 184 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 4 177 - -
Dod05g2793 184 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Dod05g2793 184 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
Dod05g2793 184 PRINTS Atypical dual specificity phosphatase family signature 58 69 - -
Dod05g2793 184 PRINTS Atypical dual specificity phosphatase family signature 41 53 - -
Dod05g2793 184 PRINTS Atypical dual specificity phosphatase family signature 99 110 - -
Dod05g2793 184 PANTHER BNAA01G23680D PROTEIN 4 177 - -
Dod05g2793 184 Gene3D Protein tyrosine phosphatase superfamily 27 180 IPR029021 -
Dod05g2793 184 CDD DSP 37 170 - -
Dod05g2793 184 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
Dod05g2793 184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 34 176 IPR029021 -
Dod05g2793 184 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 97 156 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2793 Dod-Chr5 54039952 54042772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2793 39 177 Protein tyrosine phosphatase (PTP) family AT3G06110 64.748 2.12e-65 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2793 - - lang:109352945 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2793 05 54039952 54042772 Dod05g2793 05 54039952 54042772 ECH