Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2786 ATGAGCATTATTTCGGTATCATCTGGATGCAAGCCCCTAGTGACCTTGTTCCGCCACCACCACCGCAAGGACAAGGTGGTTGTCATCATGGGAGCCACCGGCACGGGGAAGTCAAAGCTGTCCATAGACATGGCCACGCATTTCCCACCGGCCGAGGTTATCAACTCCGACAAAATGCAAGTCTACAAAGGCCTCGACATAACCACCAACAAGGTCACCGAGGAAGAGTGTCGTGGGGTCCCACACCACCTCCTAGGAACAATTGACCCCAACGCCAATTTCACTGCAAATGACTTCTGCCACCACGCAACCCTGGCCGTCGATTCCATCGTGGAGAGGGATGGGTTACCCATCATTGCTGGCGGTTCAAACTCCTTCATCGAAGCGTTGGTGAACCATCACGCTGAGTTTCGGTTAAGGTACGAGTGTTGCTTCCTCTGGGTCGACGTGGCGATCCCCGTGCTCCATTCATCACTCTCGGCACGTGTTGATCGCATGATTGAGGCTCGCCAGGTTGACGAAGTTCGTGAATTCTTCGACCCTTTTGGGGACTACACAAGAGGGATTCGAAGGGCCATTGGGGTTCCGGAATTTGATGAGTTTCTGAGAGCAGAGGAGACCACAGCCGATGAAGGGACCAAGAAGAGGCTCTTGGAGGCTGCCATTGCGAGGATAAAGATCAACAACTGCACTCTCGCAAGCAAACAGGTCCAGAAGATCCATCGCCTCCATGGGATGTGGAAGAGGAGCATGCACTGCCTCGACGCCACCCAGGCCTTCCTGAGGGGTAGCAAGGAGGAGGCAGAGCAGGCTTGGGAGGATCATGTGGTGGCCAAGAGCCGCAGGATCATGCAAAGGTTCCTGTACGAGGAAACTCATCATCATCACCATGTTCGTGCGGGTATTGTGTCGCCCTCCCCGGCTGGTGTGGTTGGGCCGCCGCCAGCCATGGCCGCGGCAACCCATTAG 969 0.5552 MSIISVSSGCKPLVTLFRHHHRKDKVVVIMGATGTGKSKLSIDMATHFPPAEVINSDKMQVYKGLDITTNKVTEEECRGVPHHLLGTIDPNANFTANDFCHHATLAVDSIVERDGLPIIAGGSNSFIEALVNHHAEFRLRYECCFLWVDVAIPVLHSSLSARVDRMIEARQVDEVREFFDPFGDYTRGIRRAIGVPEFDEFLRAEETTADEGTKKRLLEAAIARIKINNCTLASKQVQKIHRLHGMWKRSMHCLDATQAFLRGSKEEAEQAWEDHVVAKSRRIMQRFLYEETHHHHHVRAGIVSPSPAGVVGPPPAMAAATH* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2786 322 MobiDBLite consensus disorder prediction 302 322 - -
Dod05g2786 322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 138 IPR027417 -
Dod05g2786 322 Pfam IPP transferase 60 134 - -
Dod05g2786 322 Pfam IPP transferase 138 238 - -
Dod05g2786 322 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 16 295 - -
Dod05g2786 322 Gene3D - 23 288 IPR027417 -
Dod05g2786 322 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 152 251 - -
Dod05g2786 322 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 16 295 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2786 Dod-Chr5 53956126 53957902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2786 140 292 C2H2 Transcription Factor Family AT2G27760 32.961 1.13e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2786 K10760 - gmx:100812928 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2786 05 53956126 53957902 Dod03g0792 03 9861118 9863917 PCT