Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2785 ATGTTGTTTTCATTGGTATGGCCCTTCACTTTGTCTGTTCCCAGCTCCTATTTTGTTTTGATTTTGGCCAAGTTTTGTGGCATTTTGATGGGTCTTCTTCTGGCATCAGTGCCTGTCTCGAATGGAATGGCAGTGAGTAGCAGCTGTGCACCCCACATTCCATGGCTTAGGCATCCCACGACCGCAAAGCTTGGAATCTCAAAGGCAGGGAACGCTTTTCCAACGCCAACAAAATCTCCAAAGGTTCCTTCTTCAGTGCTAATTTCTGCTTCTACCACTCTTCGCCGTGCCCACACTCTACCATGGTTTTGCTGCACAGCAAGCTTCAACTCTTCTATCCAATGCAATATGCCTTCTTCAACCAAAATTGTCGTCAAAGGGCTTCCCCTTTCAACCTCTGAAGGACGTTTGATGAAGGCGTTTTCAGAGTTTGGTGAAGTTACTCAAGTCAAACTTCTCATAGATAAAGAATCTGGGCAGTCTTTAGGATCTGCATATATTTGGTTTCTCAATGAAGAATGTGCACAACTGGCTGTGAAAGAGATGAATGGAAAGTTTTTTGATGGCAGGTTTGTTCATGTTACAACTGCAAAGCCCGGATCATCTAGAAGTTGGAAGAAGACAACACCATACAAATTTTAA 642 0.4361 MLFSLVWPFTLSVPSSYFVLILAKFCGILMGLLLASVPVSNGMAVSSSCAPHIPWLRHPTTAKLGISKAGNAFPTPTKSPKVPSSVLISASTTLRRAHTLPWFCCTASFNSSIQCNMPSSTKIVVKGLPLSTSEGRLMKAFSEFGEVTQVKLLIDKESGQSLGSAYIWFLNEECAQLAVKEMNGKFFDGRFVHVTTAKPGSSRSWKKTTPYKF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2785 213 Gene3D - 112 211 IPR012677 -
Dod05g2785 213 SMART rrm1_1 122 195 IPR000504 GO:0003723
Dod05g2785 213 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 84 213 - -
Dod05g2785 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 121 199 IPR000504 GO:0003723
Dod05g2785 213 SUPERFAMILY RNA-binding domain, RBD 114 205 IPR035979 GO:0003676
Dod05g2785 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 123 192 IPR000504 GO:0003723
Dod05g2785 213 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 84 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2785 Dod-Chr5 53938534 53942158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2785 78 199 Eukaryotic Initiation Factors Gene Family AT3G11400 31.200 8.87e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2785 - - gmx:100791917 169.088