Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2776 ATGCTGCCTGATCAGAGAAAAAAGTCCTCTGTAGATGTAGACTTCTTTACAGAATATGGTGAAGGGAGTAGATACAGAATCGAGGAAGTAATTGGTAAAGGAAGCTACGGTGTTGTTTGCTCTGCATATGATACGCACACTGGAGAAAAGGTGGCAATAAAGAAAATAAATGACATATTTGAACATGTTTCTGATGCTACCCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTGCGCCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTATCAGTTTTTTCTTTATCAGCTTCTTCGAGGCATGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCTAATGCTGACTGCAAATTGAAGATTTGTGACTTTGGTCTTGCCAGAGTGGCGTTCAATGATACGCCCACGGCTATATTCTGGACGGATTATGTTGCAACAAGATGGTATAGGGCTCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCTATAGACATATGGAGCATTGGCTGCATTTTTGCTGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAGTTGGACCTCATGACTGATTTTCTTGGGACACCATCTCAGGAAGCCATAGCTAGGGTAAGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAGGAAGAGGCCAGTTCCTTTCTCCCAGAAGTTTCCTAATGCAGACCCACTTGCCCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGACCTACTGCTGAGGAGGCTCTAGCGGATCCATATTTCAAAGGCTTGGCCAAGGTTGAGAGAGAGCCTTCTGCTCTGCCAGTTACTAAGATGGAATTTGAATTTGAGAGGCGTAGGATAACAAAGGAAGATGTGCGAGAACTTATATACCAAGAGATTCTGGAGTACCATCCAAAGATGTTGAAGGAACATCTAGAGGGAGCAGAACCAACAGGTTTCATGTATCCAAGTGCTGTTGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCTCCTGAGAGGCAACATGCGTCATTACCCCGGGCGTGTGTATTGTATTCAGATAACTCAAGACAGAATGTGGTTGAGGTTTCAGAAGATCTTTCTAAGTGTTGCATCAAAGAAGTTGAGAAGCCAGCCATGGATAGGAATGGTGGTATCCCTATGACCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGGTGTGATGACTGCTTTTAAGTATAAATTTTGCTTCTTCTACTTTTTCATCTTTTGCTTTCTTCCCTATTGCTTCTCAACATGCACAGCAGACCTTTCTTTCTCCAAAGATTGGTGTGTTCTTTGTTGA 1530 0.4157 MLPDQRKKSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGMKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSQEAIARVRNEKARRYLSSMRRKRPVPFSQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSALPVTKMEFEFERRRITKEDVRELIYQEILEYHPKMLKEHLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRACVLYSDNSRQNVVEVSEDLSKCCIKEVEKPAMDRNGGIPMTRLPLQAPQNIQGVMTAFKYKFCFFYFFIFCFLPYCFSTCTADLSFSKDWCVLC* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2776 509 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2776 509 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Dod05g2776 509 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Dod05g2776 509 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2776 509 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dod05g2776 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 466 - -
Dod05g2776 509 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2776 509 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Dod05g2776 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 466 - -
Dod05g2776 509 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Dod05g2776 509 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2776 Dod-Chr5 53794027 53797620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2776 1 472 MAP Kinase Gene Family AT5G19010 86.164 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod05g2776 Pkinase 4.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2776 - K04371 gmx:100799442 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2776 05 53794027 53797620 Dod05g2776 05 53794027 53797620 ECH
Dod05g2776 05 53794027 53797620 Dod03g0782 03 9691166 9696636 PCT