Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2763 ATGGCTTCCCCTTCTTCCCCTCCGCAATCCACCCCTCCCCCAGATCCGCCCTCTGCGCTTCCTCTCGCCCTCCCCGTCCCCCCTCCGCCCTCCACCTCCTCCTCCCGCCGCCTCCCTCCGCCGTGCTGGTCCCCCGACGAAACCCTCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAGGAGGTGGCCGACGCCGTGGCCCAGCGCTGCCCCAACGCCGCGCCTCCCAAGACCCCCGTCCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAGCGCGCTAGGTCCCTCCCCGTCGCGCGATTCAACTCCTCCTGGGTCCACTTCAAGCTCATGGACTCCATGGAGAAGGGTCCCTCCCCTGCCAAGCCAGAGAACAACGATTCAGACAGCCACGACGGCGATGGCGGCGGTGTTGACCGCGACGACGATGACGAAGATCAGGATCTCTACGAGGAGATCAAGAACGGGCACGGATCCAACACCAGGAGCCTCAACAAGCTGTATCGCAACGGTTTCGGCGGTCCTGCTGGTGGCGGTAACGGTAGTGGCAGTGGAGGCGGTGGGTTTAGAATTAGGATTCCGACCGGGCTGAGCGTGGCGCAGCCTGGATCCAAGTTGTATGGGAAGGTTGGGAATCAGAAATTCAATAACCCTAATTTGAACCAGAGCGGTGGGTCGAATTTCGCGACGAGGGTGTTAGGGAAGAGGGAGAGGGAGAGGGAGAGGGACCCGGTTGGGGAGGTTGTGACTGCGATTAAGATGTTGGGAGATGGGTTCGTAAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGGCCATGAGGATGGAGATGGAGATGAAGCGCACAGAGATGATCCTTGAGTCGCAGCAGCGAATCGTGGAGGCTTTCGCGAAGGCCGTTTCCGACAAGAAGAAGAAGGCAAAGAAGGTGCCTTCTCCCCAACAATCTTAG 1020 0.6108 MASPSSPPQSTPPPDPPSALPLALPVPPPPSTSSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVAQRCPNAAPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVARFNSSWVHFKLMDSMEKGPSPAKPENNDSDSHDGDGGGVDRDDDDEDQDLYEEIKNGHGSNTRSLNKLYRNGFGGPAGGGNGSGSGGGGFRIRIPTGLSVAQPGSKLYGKVGNQKFNNPNLNQSGGSNFATRVLGKRERERERDPVGEVVTAIKMLGDGFVRMEQMKMEMAREIEAMRMEMEMKRTEMILESQQRIVEAFAKAVSDKKKKAKKVPSPQQS* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2763 339 ProSiteProfiles Myb-like domain profile. 43 103 IPR001005 -
Dod05g2763 339 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 5 336 IPR044823 -
Dod05g2763 339 MobiDBLite consensus disorder prediction 1 36 - -
Dod05g2763 339 MobiDBLite consensus disorder prediction 1 42 - -
Dod05g2763 339 MobiDBLite consensus disorder prediction 134 164 - -
Dod05g2763 339 Pfam Myb/SANT-like DNA-binding domain 41 134 IPR044822 -
Dod05g2763 339 Coils Coil 96 116 - -
Dod05g2763 339 Gene3D - 43 108 - -
Dod05g2763 339 SMART 118neu2 50 139 IPR006578 -
Dod05g2763 339 PANTHER TRANSCRIPTION FACTOR 5 336 - -
Dod05g2763 339 Coils Coil 286 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2763 Dod-Chr5 53679282 53682240 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2763 1 134 Trihelix Transcription Factor Family AT3G14180 34.247 1.77e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dod05g2763 Myb_DNA-bind_4 2.3e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2763 - - vun:114179736 383.645