Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2751 ATGGGATTTTTGCACATTGAGGAGAGTAGTGTACCTCAGTGCCCTCCTGAAGTTGAAGTTCAGGACTGCTCAAGGAGTCAAGAATCTGAAACCCCTTGTTCCAACGCTAGCACTTCTTCCAATTCAGAGGATCAGCCAGATTTAAATGGCAATAACAAACTCAATGGTTTTGTTAAATTTCTCAAGAAAGGATCTCAAGTGCCCTTCCAAACCTTGCAGCCATTTAAGAATGTTTCAAAATTCAGAAGAAAAAGCAACAGAGTCAGGGAAGACCAGATTCCATCACTCAATTCTCCACCCCTGAAATCATCCCTTGACCCCGAGCATTACCGCTTTAAGTCTTCCTGGAAGAATTTCACTCTCTCAGAGCTCCAGTCTGCAACCAATTATTTCAGCCATGAGAATTTGATTGGGGAGGGAGGCTATGCTGAGGTTTACAAAGGCAAATTGAAAGATGGAAACTATGTTGCAATTAAACGGCTGACAAGAGGGGACCAAGAAGAAATGACTGCAGATTTCTTGTCTGAGCTGGGTATTATAGTGCACGTGGACCACCCCAACATTGCTAGAGTGATTGGATATGGAGTTGAAGGAGGAATGCATCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCATCCATTCTTTATGGACCTAGAAAGAAACTGGATTGGAACATGAGATATAAGATTGCTTTGGGGATAGCCAAGGGCCTTCGCTATCTGCATGAGGAATGTCCAAGAAGGATTATTCACAGAGATATCAAGGCTTCTAACATATTGCTCTCAGAGGATTTTGAGCCACAGATAGCTGATTTTGGGCTTGCAAAATGGTTACCTGACCAATGGACTCATCATACTGTCTCCAAATTTGAAGGCACATTCGGCTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTTGATGAAAAGACTGATGTTTATGCGTATGGAGTGTTATTATTGGAGCTCATTACTGGACGACAAGCTTTGGATAGCTCACAGAAAAGTCTGGTGATGTGGGCAAAACCTCTGCTATCTAAAAATAAACTGGAAGAGCTTATTGATCCATATTTAGCTGATGCCTACGATGAAGAGCAGATGAAACATGTATTAAAGATATCAAGTGGTGAAGAAGAGAGCTTGAAGCTCATAAAAGAACTACAGAAGTCTAAACATCAAAGGACATACTCTGAAGAGCTCTTATATGCAGAAGAGTATAACTCAACTAAGTTTTTGCATGACATGGACCGACATATGGAGACTATTCTAGATTCCTCTAATTCTGCTGGTACTGAAGAAGAAAAAGAAACCATTCAAGACTAG 1326 0.4148 MGFLHIEESSVPQCPPEVEVQDCSRSQESETPCSNASTSSNSEDQPDLNGNNKLNGFVKFLKKGSQVPFQTLQPFKNVSKFRRKSNRVREDQIPSLNSPPLKSSLDPEHYRFKSSWKNFTLSELQSATNYFSHENLIGEGGYAEVYKGKLKDGNYVAIKRLTRGDQEEMTADFLSELGIIVHVDHPNIARVIGYGVEGGMHLVLQLSPHGSLASILYGPRKKLDWNMRYKIALGIAKGLRYLHEECPRRIIHRDIKASNILLSEDFEPQIADFGLAKWLPDQWTHHTVSKFEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSKNKLEELIDPYLADAYDEEQMKHVLKISSGEEESLKLIKELQKSKHQRTYSEELLYAEEYNSTKFLHDMDRHMETILDSSNSAGTEEEKETIQD* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2751 441 MobiDBLite consensus disorder prediction 20 51 - -
Dod05g2751 441 Gene3D Phosphorylase Kinase; domain 1 98 205 - -
Dod05g2751 441 SUPERFAMILY Protein kinase-like (PK-like) 110 372 IPR011009 -
Dod05g2751 441 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 28 411 - -
Dod05g2751 441 SMART serkin_6 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2751 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Dod05g2751 441 Gene3D Transferase(Phosphotransferase) domain 1 208 419 - -
Dod05g2751 441 MobiDBLite consensus disorder prediction 1 51 - -
Dod05g2751 441 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524
Dod05g2751 441 Pfam Protein kinase domain 132 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2751 441 PANTHER OS08G0249100 PROTEIN 28 411 - -
Dod05g2751 441 MobiDBLite consensus disorder prediction 83 102 - -
Dod05g2751 441 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2751 Dod-Chr5 53578370 53580513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2751 102 375 Receptor kinase-like Gene Family AT1G53420 40.780 3.14e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dod05g2751 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2751 - - lja:Lj6g3v1915960.1 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2751 05 53578370 53580513 Dod05g2751 05 53578370 53580513 ECH
Dod05g2751 05 53578370 53580513 Dod01g3418 01 75342004 75346471 ECH
Dod05g2751 05 53578370 53580513 Dod01g2370 01 62302319 62306217 ECH
Dod05g2751 05 53578370 53580513 Dod07g0499 07 6564139 6569020 ECH