Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2730 ATGTCTCACATGTTCTCTCAGCTTCAGGCCACTGTCCCCGGTCTCCTTCCCAAGGCAACAAGGGAAGTGATTGTAAACGAAACAATTAAGTACATTAAGGAACTTGAGAAGAAGAAGCAAGAGTTGGAGGAGGTCAAGGAGGAGTCAATGAAACAAGTACAAGGGAAATCGATGGTTCCATGTTATAGTAGTAGTAATAGTAGCAGTAGTAGTAACAGGAATTGCTCTATCACTGTTACTACTACTGTCTCTAACAATGTGGCCTTCTTTGGCGTTCAATCGGAGGCTCGCGCTGGTTTCATCACAGTGATTTTCAAGGTGTTCAGCAAGCACCGAGCTGAAATTTTGGCTGCAAATGTCTCTGTTAATCAAGGGAATCTGGTATTAGCAATCACTGCAGTATTGCAAGATGGTGGTGATGGAAATGGAGCTGCTGAAATGATTAAGAGGGAGATTATGAGTTTGTAG 468 0.4295 MSHMFSQLQATVPGLLPKATREVIVNETIKYIKELEKKKQELEEVKEESMKQVQGKSMVPCYSSSNSSSSSNRNCSITVTTTVSNNVAFFGVQSEARAGFITVIFKVFSKHRAEILAANVSVNQGNLVLAITAVLQDGGDGNGAAEMIKREIMSL* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2730 155 Gene3D - 1 59 IPR036638 GO:0046983
Dod05g2730 155 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 154 - -
Dod05g2730 155 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 61 IPR036638 GO:0046983
Dod05g2730 155 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 154 - -
Dod05g2730 155 Coils Coil 25 52 - -
Dod05g2730 155 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 35 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2730 1 51 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 45.098 1.16e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2730 - - aprc:113874666 156.377