Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2725 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGGGGACACTAATGCTGGGGTCAAGAAGGAAGTGCCCAAGAACGATTCTTTCAAGGAAGCTCCTCTTGTTCATCAGCCTCACCACCCCACCAGGGTTGTTAGCTCAGATAAATCAAAATTGCGGAGTGGCTCAGATCCTAAGAAGGAACCACCAGCTCCCAAGGAGGTGCTGCCAACAGCCAATATTGCTGCACAAACGTTTACATTCCGAGAGCTTGCAACTGCTACAATGAATTTTAGGCCAGAATGTTTGTTAGGTGAAGGGGGCTTTGGGCGTGTTTACAAAGGTCGCCTTGAGAGCACAGGACAAGTAGTTGCTGTAAAACAGCTTGACCGAAATGGCCTTCAAGGAAATCGAGAATTTTTGGTGGAGGTTCTCATGCTTAGTCTCTTACACCACCCAAATCTTGTGAACTTAATTGGTTATTGTGCCGATGGTGATCAGCGGCTTCTTGTTTATGAACTTATGCCATTGGGGTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCCCTTGACTGGAACACAAGGATGAAAATAGCAGCTGGTGCAGCGAAAGGATTGGAATATTTACATGACAAAGCAAATCCTCCTGTAATATATAGAGACTTAAAATCATCCAACATCCTCCTAGATGAGGGTTATCATCCCAAGTTATCAGATTTTGGGTTAGCAAAACTTGGTCCTGTTGGCGATAAAACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGGCAACTAACTCTGAAATCTGATGTCTACAGTTTTGGAGTGGTCTTCCTTGAACTTATTACAGGGCGCAAGGCTATTGACAATACGCGTGCACCAGGAGAGCATAATCTTGTTGCATGGGCACGACCTCTTTTTAAAGACCGTAGGAAGTTCCCCAAAATGGCTGACCCGCTACTTCAAGGCCATTATCCGATGCGAGGACTATACCAAGCACTTGCTGTTGCAGCAATGTGTTTGCAGGAACAAGCTGCTACAAGGCCTCTTATTGGGGATGTTGTGACTGCTCTCACATACCTGGCCTCACAGACATATGACCTAAATGCAGCCAGTCAGTCAAACAGAGTTGGTTCATCAACCCCAAGGAGTAGGGATGATCGAAGGAGCGGGGCAGATGGCGTTGATAGCCCGGGCCATGGATGGCTTGGCTCCCCTTCCACCCGTAGAAACTCACCTGATTACAGGAAGAGAGATGGTGGTGAACCGAGTGCTGGAGCAGAGTTGGGCAAGAGTGAAACTGGTGGTGGGTCAGGGAGGAAGTGGAGATTGGGTGATGTGGAAAGGCAGGAATCTCAGAGAGGCAGCCCTGTAAATACTGGAAGAGCTAGAGAGACTCCAAGGAACCGCGACCTGGACAGAGAACGTGCAGTTGCAGAAGCAAAAGTATGGGGCGAGAATTGGAGAGAAAGAAAGCGGGCAAATGCAATGGGTAGCTTTGATGCTGCAAATGAGTAA 1542 0.4741 MGGCFPCFGSSNKGDTNAGVKKEVPKNDSFKEAPLVHQPHHPTRVVSSDKSKLRSGSDPKKEPPAPKEVLPTANIAAQTFTFRELATATMNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYELMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGHYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDLNAASQSNRVGSSTPRSRDDRRSGADGVDSPGHGWLGSPSTRRNSPDYRKRDGGEPSAGAELGKSETGGGSGRKWRLGDVERQESQRGSPVNTGRARETPRNRDLDRERAVAEAKVWGENWRERKRANAMGSFDAANE* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2725 513 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL27 1 507 - -
Dod05g2725 513 Gene3D Transferase(Phosphotransferase) domain 1 169 388 - -
Dod05g2725 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Dod05g2725 513 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2725 513 Pfam Protein kinase domain 97 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2725 513 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g2725 513 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Dod05g2725 513 PANTHER OS07G0668900 PROTEIN 1 507 - -
Dod05g2725 513 MobiDBLite consensus disorder prediction 380 484 - -
Dod05g2725 513 MobiDBLite consensus disorder prediction 19 65 - -
Dod05g2725 513 Gene3D Phosphorylase Kinase; domain 1 67 168 - -
Dod05g2725 513 SUPERFAMILY Protein kinase-like (PK-like) 69 366 IPR011009 -
Dod05g2725 513 MobiDBLite consensus disorder prediction 1 69 - -
Dod05g2725 513 CDD STKc_IRAK 98 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2725 Dod-Chr5 53388448 53392869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2725 4 371 Glycoside Hydrolase AT3G07070 65.508 6.96e-170 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod05g2725 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2725 - - gmx:100814575 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2725 05 53388448 53392869 Dod03g0708 03 8837596 8846097 PCT