Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2720 ATGAAAAGATTGATAAAAACCGTTAAACGGCGTCGTTGGGGTGGTGATCTGCCTGAAGCTGAATCCGCGGCGGCGATGGAACGGTGTTCTTCCGTCCGGCGGAGGAGGGAGGAGGAGGAGGTGGTGGTGAGGAAGGTGATATGGCCGGCGATTGAGGGGCATAAGTGTCCAATATGTTTGAGGGATCTAGAAGACTGCATCCGGCGGTGGAGTCACGTGCGAAGAACGTGCCCACTCTGCAATTCGGAGTTCAACTCGTGGTTCTGCAACCTCAGCCTTTCTTCCAGAAGCTTCCGCAACCACGTCTTACCCTCTCCCTCTGAATCTCACTCTCACCGTTCCAATTCTGATGCAAACCTTTCACGCCTTCGCCCCAGCAGAGTTGTTGGGAGAAGGAGGGTTGCATTAAGTAATGGGAGAAGGAGGGCACTGCCGTGGAGAAGATCATTTGGGCGTGCTGGATTTGTGAGCCCTGATGTTATTGCTCAGAGGAAGCTTGAATGGCGATCTAGGATATACCATCAAAGGCTGCAGCCTGATTCTACAACCCTAAGGTGTCTTGAGCCAGGATGCAAGGGCTGCGGCCCATGCAATTTACTTGTTTCCATGGGGAAAAATCTCTTATGGAATAAATCAAGAAAAGATGCTGTGAAGAAGGAAATTCTACAACGGGTTGAGCCATGGATAATGAGGGAGCTACAAGCTATCTTAGGAGACCCAGACCCAACTATCATTGTTCATGTGGTGACTTCACAGTTCATCACATGGCTGGAAGAGAAAGCTAAAATGCCGTCTGGACAACTTGATGTTGGGGATTGCTTCATTTCACCTCTTCGACCATTCCTGCATGATAAAGCCGGTATCTTTTGGCATGAACTAAGCTGCTTCGCAGAGAGTTGTCACAACATGGATACCTACGATGAAGTCGTTGAATATAAACATCAGGAGTGA 951 0.4921 MKRLIKTVKRRRWGGDLPEAESAAAMERCSSVRRRREEEEVVVRKVIWPAIEGHKCPICLRDLEDCIRRWSHVRRTCPLCNSEFNSWFCNLSLSSRSFRNHVLPSPSESHSHRSNSDANLSRLRPSRVVGRRRVALSNGRRRALPWRRSFGRAGFVSPDVIAQRKLEWRSRIYHQRLQPDSTTLRCLEPGCKGCGPCNLLVSMGKNLLWNKSRKDAVKKEILQRVEPWIMRELQAILGDPDPTIIVHVVTSQFITWLEEKAKMPSGQLDVGDCFISPLRPFLHDKAGIFWHELSCFAESCHNMDTYDEVVEYKHQE* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2720 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TOPORS 49 313 - -
Dod05g2720 316 SUPERFAMILY RING/U-box 46 87 - -
Dod05g2720 316 PANTHER TOPOISOMERASE I-BINDING, ARGININE/SERINE-RICH A-RELATED 49 313 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2720 30 294 C3H Transcription Factor Family AT2G39100 38.966 1.70e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2720 - - adu:107464375 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2720 05 53358870 53361580 Dod05g2720 05 53358870 53361580 ECH