Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2706 ATGTCTCAGTTTTACTATCATCACCCTCTAAGAAGATCTCATCTTCTCTACCTCAAAAAGAAGAGTTTCTCTGCCATTTTCTCCGAACCATTTCCATTACCATCACCATCACCATACCCAAAATGTTTCCTTTTCTTGCAACACACGCGCCACCCCTCACCCATCCCTCTTCACTTCTTCTCAACCGATTCCGCCACCTCACATCTACAATCTTTCACGGTGTCTTACCTTAGGAACAAGTGCGGCTTCTCGCAAGAAGCTGCTCTCAAAGCATACAAGCGAGCTCGATTCGACACCCCCGACAAGCCCGATTCAGTCATCGCCTTCTTCAGAAACCATGGTTTCTCAAACTCCCAGATCAACAGCATCATGGGCAAGGCACCGGAGCTGCTTACATGCGACCCCAATAAGAGGGTGTTGCCAAAGTTTCAATTTTTAGCCTCCAAAGGTGCTTCTCCCTCTGACATCGTCCTCATGGTGACTAGGAGCCCGGGGTTCCTGCGTAAGAGCCTTGAGAACGTCCTAGTCCCTGTGTTTGAAGTGGTTAGGAGGTTCTACCCCTCTGATGAGAAAGCTCTTGCTTGTGTAATTGCAGCGCCCACTTTGATTGGTGATGCTCGCGTCCAACAAAATGTGAATTCGCTCCTTGATGAAGGTTTGACTGAGTCAAGCGTTTACCATTTGCTTCGCTCTAGGCCTTCTATACTCCTCACTGCTGACTTGTGGAAAACTGTGCAGGAAGTGAAGCAATTGGGTTTTGACCCTTCTAAGGTAAATTTCAGTGTGGCATTGCTGGCCAAAAGGGCTGTCACCAAATCACGGTGGGATGCCAAAATTGAAGCCTTTAAGACTTGGGGTTGGTCCGAAGTAGAAATTTTCGATGCATTTAGGAGGCATCCGCAGTTTATGCTGAGGTCTGAGGAGAAACTCAATGCAGTGATGAGATTTTGGATCGGTAAGCTTGGCTGGGATCCTTCCGCACTTCATGTGGCGCCGATCATCTTTGGATTTAGTTTGGAGAAGAGGATTATTCCAAGGGCTTCAGTTGTCAAGTATCTTCTCTCCAAAGGTTTGATGAAGAAGAATGCTAGCTTAGCTACACCATTTGGTTTGACTGAGAAGATGTTCCTGCAAAAGTTTGTGACATGTTTTAAGGAGAATGATACGTCTCAGCTGTTGAAGCTGTACCGGGGAAGACGTTAG 1203 0.4688 MSQFYYHHPLRRSHLLYLKKKSFSAIFSEPFPLPSPSPYPKCFLFLQHTRHPSPIPLHFFSTDSATSHLQSFTVSYLRNKCGFSQEAALKAYKRARFDTPDKPDSVIAFFRNHGFSNSQINSIMGKAPELLTCDPNKRVLPKFQFLASKGASPSDIVLMVTRSPGFLRKSLENVLVPVFEVVRRFYPSDEKALACVIAAPTLIGDARVQQNVNSLLDEGLTESSVYHLLRSRPSILLTADLWKTVQEVKQLGFDPSKVNFSVALLAKRAVTKSRWDAKIEAFKTWGWSEVEIFDAFRRHPQFMLRSEEKLNAVMRFWIGKLGWDPSALHVAPIIFGFSLEKRIIPRASVVKYLLSKGLMKKNASLATPFGLTEKMFLQKFVTCFKENDTSQLLKLYRGRR* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2706 400 Gene3D Transcription termination factor 3, mitochondrial 205 387 IPR038538 -
Dod05g2706 400 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 64 399 - -
Dod05g2706 400 SMART mt_12 325 359 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 SMART mt_12 121 152 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 SMART mt_12 157 188 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 PANTHER CGI-12 PROTEIN-RELATED 64 399 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 Pfam mTERF 206 376 IPR003690 GO:0003690|GO:0006355
Dod05g2706 400 Pfam mTERF 108 258 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2706 Dod-Chr5 53206564 53208755 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dod05g2706 mTERF 2.7e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2706 K15032 - gmx:102666622 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2706 05 53206564 53208755 Dod05g2706 05 53206564 53208755 ECH