Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2686 ATGATGGAGGAGTCGGTAGGGCAAAAGTGGGGGCATAGAGAGTTCGCTTTGGCGTCAGTTGGGGACCTCTCTTCTTCTGGTTCGCCGGGAATTGCTCGCTTCACATGTGAAGGTCTTCAAATTCATCAGCAATCTCAGCAGGTTCCCCTCAATGTCGATCTCCGAACTGCTCAGCTATTCAAGTTGGGTCCTGTTCAATCGGTTTGTATGCTGGAAGAAGGGTCTGATGTTGGTAAAAAGACATCATATTCCAGGGGAATCACTGTCGTGTTTAGTAACGAGGAGGAGAGTGCGGCCTTCCATTGTTTAGTCCAACAATGGAAGAAGGAACTCAATGTTCAAGGAAGAAGCTTGCCAAATGGAACTATTATAAATAGTAAGAGCAAATTTGATGAAAAGATAGAGTCTTCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTCCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCGGCTGTTATGGAGAACCGTGCTGATTTCACAGGTCGTGTAGTAGTTGATGTCGGTGCTGGTAGTGGTATTTTGTCACTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCTTCTGAAATGGCAGAATATGCGAGGAAACTTATAGCTGGAAACCCAACACTGGCTCAACGAATTACAGTGATTAAAGGTAAAGTTGAGGATGTTGAATTGCCGGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGTACATTGTTGGTTAATGAAAGAATGCTAGAGTCTTATGTCATTGCCAGAGATAGATTTCTCACCCCTACCGGAAAAATGTTTCCTGCCGTGGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATTGAAATTGCTAATAAGGCGCTGTTTTGGCAGCAGCAAAACTATTATGGTGTTGACTTGACGCCTTTACATGGGACTGCATTTCAGGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATGGCTCCTCCAGTGTCCCACGTGATGGACTTTACCAAGATTAAGGAAGAAGATCTGTATGAAATTGACATTCCTCTGAGATTCACATCCTCCGTGTGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTCTTCAATGGAAGTACTGTACAAAGGTGGCTTACCACTGCTCCTGGTTCACCTACAACCCACTGGTACCAGTTACGTTGTGTTCTCTCTCAGCCAATTCATGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCGCTTGATTGCCCACAATGCGCAGAGTTATACAATATATTTGACATTGTCAGCTAAAATGTTGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCATGTAAGCTTGATCTGAAAGAACCGTACTATAGAATGTCTCAACCGCAAGCTTATACTTTAGCCCAAGATAATCAACCTCAACCACTTCTACAGACACAGGACATACACATCCAATCTCAGGATCTGGATGAACCTGATATAATGCAACAGCATTCACCTAATTCATGCGTTCAGATTGAGTCACTGATGCATAATATTTAA 1605 0.4305 MMEESVGQKWGHREFALASVGDLSSSGSPGIARFTCEGLQIHQQSQQVPLNVDLRTAQLFKLGPVQSVCMLEEGSDVGKKTSYSRGITVVFSNEEESAAFHCLVQQWKKELNVQGRSLPNGTIINSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPAVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLMAPPVSHVMDFTKIKEEDLYEIDIPLRFTSSVCARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIHVMAGQEITGRLRLIAHNAQSYTIYLTLSAKMLGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYTLAQDNQPQPLLQTQDIHIQSQDLDEPDIMQQHSPNSCVQIESLMHNI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2686 534 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 2 490 - -
Dod05g2686 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 135 450 IPR025799 GO:0016274|GO:0018216
Dod05g2686 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 251 - -
Dod05g2686 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 2 490 IPR025799 GO:0016274|GO:0018216
Dod05g2686 534 CDD AdoMet_MTases 181 281 - -
Dod05g2686 534 Gene3D Vaccinia Virus protein VP39 122 282 IPR029063 -
Dod05g2686 534 Gene3D - 284 492 - -
Dod05g2686 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 455 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2686 Dod-Chr5 53016117 53022490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2686 142 434 C2H2 Transcription Factor Family AT3G12270 33.439 1.00e-37 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2686 K05931 - gmx:100780736 941.799