Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2685 ATGATGGAGGAGTCGGTAGGGCAAAAGTGGAAGCAGAGAGAGTTCGCTTTGGCGTCGGTGGGGGACCTCTCTTCTTCTGAGTCGCGGGGGATTGCTCGCTTCACATGTGACGGTCTTCAAATTCATCAGCAATCTCAGCAGGTTCCTCTCAATGTCGATCTCCGAACTGCCCAGCTATTCAAGTTGGGTCCTGTTCAATCGGTTTGTATGATGGAAGAAGGGTCTGATGTTGGTAAAAAGACATCATATTCCAGGGGAATCACTTTCGTGTTTAGAAATGAGGAGGAGAGTGCTGCCTTCCATTGTGTAGTCCAACAATGGAAGAAGGAACTCAATGTTCAAGGACGAAACTTGCCAAACGGAACTATTATAAATAGTAAGAGCAAATTTGATGAAAAGATAGAGTCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTCCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACCTATTATGCGGCTGTTATGGAGAACCGTGCTGATTTCACAGGCTGTGTAGTAGTGGATGTTGGTGCTGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCTTCTGAAATGGCAGAATATGCGAGGAAACTTATAGCTGGAAACCCAACACTGGCTCAACGAATTACAGTGATTAAAGGAAAAGTCGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATCTCTGAGCCCATGGGCACATTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCCGAGATAGATTTCTCACCCCTACTGGAAAAATGTTTCCGGCTGTAGGAAGGATTCACATGGCACCTTTCACTGATGAATATTTGTTTATGGAAATTGCTAATAAGGCAATGTTTTGGCAGCAGAAAAACTATTATGGTGTTGATTTGATGCCTCTACATGGGACTGCATTTCAGGGATACTTCTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATGGCTTCTCCAGTGTTCCACGTGATAGACTTCAACAAGATTAAGGAAGAAGATCTGTATGAAATTGACATTCCTCTGAGATTCACATCCTCTGTATGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTCTTCAATGGAAGCACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCTACAACCCACTGGTACCAGTTACGTTGTGTTCTCTCTCAGCCAATTCATGTCATGGTAGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAACGCACAGAGTTATACGATATATTTGACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAGACATCATCCTGTAAGCTTGATCTGAAAGAACCGTACTATAGAATGTCTCAACCGCAAGCTTATACATTAGCCCAAGATCAGCAACCTCAACCACTTCTACAGACGCAGGATATACACATTCAATCTCAGGATCTGGATGAACCCGATATGATGCAACAGCATTCACCTAATTCATGTGTTCAGATCGAGTCACTGATGCATAATATTTAA 1605 0.4305 MMEESVGQKWKQREFALASVGDLSSSESRGIARFTCDGLQIHQQSQQVPLNVDLRTAQLFKLGPVQSVCMMEEGSDVGKKTSYSRGITFVFRNEEESAAFHCVVQQWKKELNVQGRNLPNGTIINSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRADFTGCVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPAVGRIHMAPFTDEYLFMEIANKAMFWQQKNYYGVDLMPLHGTAFQGYFSQPVVDAFDPRLLMASPVFHVIDFNKIKEEDLYEIDIPLRFTSSVCARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIHVMVGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYTLAQDQQPQPLLQTQDIHIQSQDLDEPDMMQQHSPNSCVQIESLMHNI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2685 534 Gene3D Vaccinia Virus protein VP39 122 282 IPR029063 -
Dod05g2685 534 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 135 450 IPR025799 GO:0016274|GO:0018216
Dod05g2685 534 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 2 490 IPR025799 GO:0016274|GO:0018216
Dod05g2685 534 CDD AdoMet_MTases 181 281 - -
Dod05g2685 534 Gene3D - 284 492 - -
Dod05g2685 534 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 456 IPR029063 -
Dod05g2685 534 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 251 - -
Dod05g2685 534 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 2 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2685 Dod-Chr5 53002696 53013909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2685 142 431 C2H2 Transcription Factor Family AT3G12270 33.441 4.29e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2685 K05931 - gmx:100780736 938.717