Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2662 ATGATCAACGACATTGAGATGTGGATGAGCGCAACCATCACGGACCAAGACACCTACTTGGACGCCTTGGAGGAGTTGAACTCCAACGCCGCCAACGCCTTCCTCGAGGACATGAAAACCGCCATGAAGAACTTGATGGAGTTCTCAAGCAACAGCTTGGTCATTGTGGCCAAGATCCTAAGACTGTTGTTGAAGTCCAACAGTGCTGTCCACCAGCAATTGTTAAGGTTTCCAGAGTAG 240 0.4958 MINDIEMWMSATITDQDTYLDALEELNSNAANAFLEDMKTAMKNLMEFSSNSLVIVAKILRLLLKSNSAVHQQLLRFPE* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2662 79 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 60 IPR035513 -
Dod05g2662 79 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 3 59 IPR035513 -
Dod05g2662 79 PANTHER PECTINESTERASE 3 68 - -
Dod05g2662 79 PANTHER PECTINESTERASE 1-RELATED 3 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2662 Dod-Chr5 52797733 52797972 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2662 2 73 Carbohydrate Esterase AT1G53840 40.789 2.59e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2662 - K01051 jre:109004988 74.7146