Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2661 ATGGCTGGGGTTAATAGCAGCCAAGAGAGTAAGAAGAAGTTCGCCATTGTTGGCGTCTCTTCAGTCCTCCTTGTGGCCATGGTAGCTTGCGTGGCCATTGGTATTACCCGCGGCGGCGAAGAACCCGGTGGGGGTGGCAGCAGCGGCGACAACAAAATCACGCAATCACAGAAGACAGTTCGGGTGATTTGCCAGTCGGCAGAATACAAAGAAACTTGCCAGAGGAGCATGGAGAAGGCATCAAACGGGACCACAGACATGAAAGCGCTCATAATGGCCGCGTTTAACACCACGGCTGAGGAATTGTTGAAGCAAATCAACAACTCCACGCTGTACCAAGAGTTGGCCACGAATGACAGGACCAAACAGGCCATGGATATTTGCAAGGAGGTCCTTGGCTATGCAGTTGATGACATCAAGAAATCGGTTCACACATTGGACAAGTTTGACCTTAGCAGGTTGAGTGCATACGCCTATGACCTCAAGGTTTGGCTCGCGGGTACCCTCTCCCACCAACAAACTTGCTTGGATGCATTCGAGAACACAACCACAGAAGCTGGCCAAACCATGGCCAAGATGCTCAACACCTCCTTGGAGCTCAGCAACAATGCATTGGACATACTCAACGGCGTGTCCAGTTTCTTGAAGGATTTTAACCTGGGCTCGATCGCCTCAAAATTCAACTTCACCACACCAATAAACAGGAAGCTTCTCTCTAACGAAGAAGAAACCCTTGTGGATGGTTTCCCTTCATGGGTTGGTGAAGGCCAAAGGCGTCTCCTCAGCTTATTCTCTGACCCCACCAGGGGCCTCAAGCCCGATGTTGTTGTGGCTCAAGATGGGAGTGGACAGTTCAAGACGGTCACTGAAGCTCTTAAACAAGTTCCCAGGAGGAACAAGAATCGTTTTGTAATCTACGTCAAGGCTGGTATCTACAACGAGTACGTTACCTTGGAAAGCCATATGAGCTCTATCACAATCGTTGGAGATGGTCCCACTAAGACCAGATTCAACGGCAACAAAAACTTCGTCGATGGCTTGCAAACTTACTTCACCTCCACCTTCAGTGTGAACGCTCCTGACTTCACAGCCATAAATGTTGGGTTCGAGAACTCAGCAGGAGCCGCGAAGCACCAAGCGGTGGCACTCCGCGTGACAGCAGACAAGGCCGTGTTCTACAATTGCCACATGGACGGCTACCAAGACACCCTGTACGTACAATCCCAGCGCCAGTTCTACCGCGACTGCGTCATCACCGGCACCATCGACTTCGTCTTCGGCGACGCCATCGGAGTCTTCCAGAACTGCACCCTCATCGTGAGGAAGCCCCTCGACAACCAGCAGTGCATGGTCACAGCCGGTGGGCGGTCAAAGGTCGACAGCCCCACCGGCCTGGTCTTCCAGAGCTGCCACTTCACCGGTGCACCCGAGATAGCCGCTATGCCAAAGAAGGTGTCCTTCTTGGGAAGGCCATGGAGGGAGTACTCTAAGGTGGTCATCTTGGACTCCGTCATTGAGAGCATCTTCCTCCCCGAAGGGTACATGGCATGGATGGGAAGTGCCAACAAGGACACGTGCATCTATTACGAGTACAACAATAAAGGTCCCGGTGCTAGCACCGCTTCTAGGGTGAAGTGGCCTGGTGTGAAGAGCATCACTGCTGTTGAGGCTAACGATTACTACCCAGGGAGGTTCTTTGAGATCGCTAACTCCACTCAGCGTGATGCTTGGATCGTCCAGGCTGGGGTACCCTACTCTCTTGGCCCAATGCTGCCAACCCCACAGCTCCCAGTCCCAACCCTACAGCTTCCTACTCTTTTTTAA 1824 0.5247 MAGVNSSQESKKKFAIVGVSSVLLVAMVACVAIGITRGGEEPGGGGSSGDNKITQSQKTVRVICQSAEYKETCQRSMEKASNGTTDMKALIMAAFNTTAEELLKQINNSTLYQELATNDRTKQAMDICKEVLGYAVDDIKKSVHTLDKFDLSRLSAYAYDLKVWLAGTLSHQQTCLDAFENTTTEAGQTMAKMLNTSLELSNNALDILNGVSSFLKDFNLGSIASKFNFTTPINRKLLSNEEETLVDGFPSWVGEGQRRLLSLFSDPTRGLKPDVVVAQDGSGQFKTVTEALKQVPRRNKNRFVIYVKAGIYNEYVTLESHMSSITIVGDGPTKTRFNGNKNFVDGLQTYFTSTFSVNAPDFTAINVGFENSAGAAKHQAVALRVTADKAVFYNCHMDGYQDTLYVQSQRQFYRDCVITGTIDFVFGDAIGVFQNCTLIVRKPLDNQQCMVTAGGRSKVDSPTGLVFQSCHFTGAPEIAAMPKKVSFLGRPWREYSKVVILDSVIESIFLPEGYMAWMGSANKDTCIYYEYNNKGPGASTASRVKWPGVKSITAVEANDYYPGRFFEIANSTQRDAWIVQAGVPYSLGPMLPTPQLPVPTLQLPTLF* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2661 607 PANTHER PECTINESTERASE 7 592 - -
Dod05g2661 607 CDD PMEI-like_3 63 213 - -
Dod05g2661 607 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
Dod05g2661 607 Gene3D - 271 590 IPR012334 -
Dod05g2661 607 SMART PMEI_2 55 207 IPR006501 GO:0004857
Dod05g2661 607 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Dod05g2661 607 PANTHER PECTINESTERASE 7 592 - -
Dod05g2661 607 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 210 IPR006501 GO:0004857
Dod05g2661 607 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Dod05g2661 607 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Dod05g2661 607 Pfam Pectinesterase 274 566 IPR000070 GO:0030599|GO:0042545
Dod05g2661 607 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Dod05g2661 607 SUPERFAMILY Pectin lyase-like 271 586 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2661 Dod-Chr5 52793967 52796247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2661 3 594 Carbohydrate Esterase AT3G05610 41.275 1.88e-176 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2661 K01051 - gmx:100820068 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2661 05 52793967 52796247 Dod05g2661 05 52793967 52796247 ECH
Dod05g2661 05 52793967 52796247 Dod03g1302 03 16608301 16610863 PCT