Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2653 ATGAATTCCAACTATGCCAAATCCAACAACCAAAACAAATCCTCATCCCTCTCACTCAACAACTTCAATTTCGATTTCGATCTCGGCATCGGATCCAACCGCGCCAAATCCCTAAACGACCAGAAAAACCCCAATTCCAACCCCTCCTATTCCTATGCCTCCTCCACCACCACCACTTCTTCTTCATCATCGCAACCAAGACCCGCTTGGCAACCCAACAAGCCATCCTGGACCCACCAACCCGCCCCGACTCCGGCCACTCAGGCTGGGTTGCCCGGTGCATCCGCTTCCATGGTCGGTGATATCTTCGGCAAGACCTGGGGATCATCTCAACCCTCCTCTGGTTCCGCTTCCACTATCGGGATCGTTAACAAAAACCCTAATCTTTTTGGGGATTTGGTGAGTTCTGCTATTGGCCAGGGTTCCAGGAACGCTGGCAACGTCCCTCTCAAGAACGCAACTCCTGCTGCTTCCAAGGTTTCAGGTCCCGCATCCAGCAGTAGCACCTTCTCCATGGGGAATATGGCAGATTCTTTGCCCAAAACTGCTAACACTGCACAGAGTCGTGGAGCTTGGGGATCTTCTGGGAATTTGGGGGGTTTTAGTACAGGGTACAGTGCTAACAGCATGAATCCCAATAAAAGCTCCAATCTTGGGGGTCCTTCATTGAGAAGTATGAGTGGTAGTGGTGGTGGTGCTGCAGCTGGAAGTGGTGGATTCGGTTCTAGTAACAAAGATCCGTTTAGTTCTTTGTCTGGTATTGGATCGAAGCAATCTGGTACTGGTAGTCTTAATTCAGCTGCTAAATCCCAGAAGAATGATTCAGGAGGGGACGATGGTTTTGGAGATTTTCTGAATGCTTCAAAACCAAGCTCTACGGCTTTTCCATCGAGTGGTGCTGCTGGAATTGATATTGATATTGGTTTTGGTGGATCTGCCACCTCAAATCAGACCCCAGTACAGGGATCTGGTGGTGGTGGCGATCCGATGGACATGTTCTTCTCATCTTCCTCGGCCTCAGCTGGCGGTGGTGGTGCCGCCGTGCCATCCCAAGGATTTGGTGGGCAGCCGGCCTCTGAAATGGATGATTGGGGTTTGGATTCAGAGTTTGGTGGGGGAGGGCATGATGTTGGGGGCACAACCACTGAGCTTGAAGGGCTTCCACCTCCTCCTGCTGGGGTGTCAGGATCTGCTGCCAAGGGCAAGGGGATGGACAATTACAAGCAGGGCCAGTTTGCTGATGCTATCAAGTGGCTTTCCTGGGCTGTCATCCTTCTAGAGAAAGCCGGCGATAGTGCAGGCACAGCGGAGGTTTTGTCATGCAGAGCTTCGTGTTACAAGGAAGTTGGGGAGTATAAAAAGGCAGTGGCGGATTGTACGAAGGTTCTTGAAAACGATGAGAAGAATGTATCGGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGCATGGAAAAGTACAAACTTGGTGCTGAAGACTTGAGGACTGTGCTGAAGATTGATCCTGGGAATAGGGTTGCTAGAAGTACCGTTCACCGGTTGGCTAAGATGGCCGATTAA 1557 0.51 MNSNYAKSNNQNKSSSLSLNNFNFDFDLGIGSNRAKSLNDQKNPNSNPSYSYASSTTTTSSSSSQPRPAWQPNKPSWTHQPAPTPATQAGLPGASASMVGDIFGKTWGSSQPSSGSASTIGIVNKNPNLFGDLVSSAIGQGSRNAGNVPLKNATPAASKVSGPASSSSTFSMGNMADSLPKTANTAQSRGAWGSSGNLGGFSTGYSANSMNPNKSSNLGGPSLRSMSGSGGGAAAGSGGFGSSNKDPFSSLSGIGSKQSGTGSLNSAAKSQKNDSGGDDGFGDFLNASKPSSTAFPSSGAAGIDIDIGFGGSATSNQTPVQGSGGGGDPMDMFFSSSSASAGGGGAAVPSQGFGGQPASEMDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSAAKGKGMDNYKQGQFADAIKWLSWAVILLEKAGDSAGTAEVLSCRASCYKEVGEYKKAVADCTKVLENDEKNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPGNRVARSTVHRLAKMAD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2653 518 MobiDBLite consensus disorder prediction 149 194 - -
Dod05g2653 518 Gene3D Tetratricopeptide repeat domain 396 517 IPR011990 GO:0005515
Dod05g2653 518 Pfam Tetratricopeptide repeat 443 469 IPR019734 GO:0005515
Dod05g2653 518 Pfam Tetratricopeptide repeat 471 502 IPR019734 GO:0005515
Dod05g2653 518 MobiDBLite consensus disorder prediction 212 285 - -
Dod05g2653 518 MobiDBLite consensus disorder prediction 30 95 - -
Dod05g2653 518 MobiDBLite consensus disorder prediction 158 194 - -
Dod05g2653 518 SMART tpr_5 436 469 IPR019734 GO:0005515
Dod05g2653 518 SMART tpr_5 396 429 IPR019734 GO:0005515
Dod05g2653 518 SMART tpr_5 470 503 IPR019734 GO:0005515
Dod05g2653 518 MobiDBLite consensus disorder prediction 242 273 - -
Dod05g2653 518 SUPERFAMILY TPR-like 398 508 IPR011990 GO:0005515
Dod05g2653 518 MobiDBLite consensus disorder prediction 34 85 - -
Dod05g2653 518 MobiDBLite consensus disorder prediction 312 359 - -
Dod05g2653 518 PANTHER OS03G0340700 PROTEIN 1 518 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2653 411 513 Calmodulin-binding Proteins AT3G25230 31.132 1.45e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2653 - - gmx:100799789 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2653 05 52743289 52746177 Dod05g2653 05 52743289 52746177 ECH