Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2650 ATGGCGACGGAGCAGTTGATGCTGGGTAGAGGTGGCGGCCCCGGCTACGTTCAAATGCAATCGGAGGCGTCCACGTCGGCGTTCCGGCAAGCGGCGGAGCCAGGCCGGATCTTCGATGAGCTGCCGGAAGCCACCATTGTGTCGGTGTCTCGCCCCGACGCCGCTGACATCAGCCCGATGCTCCTCACTTACACCGTTCTTGTTCATTACAAACAGTTCAAGTGGCAGCTGGTGAAGAAAGCTTCTCAAGTGGTTTATCTGCATTTTATGTTAAAGAAGCGCGCCTTTTTTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAGTGGCTTCAAAATCTAGGAATGGGAGACCTCTCACCGGTGGTGCAAGATGATGATGATGATGATGATGAAGCTGACGATGAAGCCATTCCCTTGCATCATCACCATCATCATCATGATGAAAGTGCTAAAGACAGAGATGTTCCATCTAGTGCTGCTCTACCAATTCTACGGCCAGCATTAGGAAGACAGCACATGGTAGCAGGCAGGGCAAAGACTGCGATGCAAGGGTATCTGAATCACTTTTTGGGAAATACCAGTATTGTTAACTCTCGGGAGGTTTGCAAGTTTTTGGAGGTATCAATGTTATCCTTTCTTCCTGAATATGGCTCTAAGCTGAAGGAAGAATATGTGAGGGTCATGCATCTGCCCCAAATTCCAAAGAATGATGACTCCAGAAAGTGTTGTATGTCTCACTGTTTTAGTTGTTGCAATGATAAGTGGCAAAAGATCCTTTTGACAGTGCAACCCTTGGACATTATTTGTTTTGATGTACTACCTGGCTCAGAGGGGAATGGTGTTGGTCATCTATCACTGGCACAAGAAATGAAGGAAAGAAATCCTTTACGCCATTCATTTAAGGTAACTTGTGGAAACCGGAGCATTAGAATTAGAGCGAAAAGTAGTGCTAAAGTTAAAGACTGGGTTGCTGCCATTAATGATGCTGGACTCAAGCCTCCTGAAGGATGGTGCAATCCCCACCGTTATGGTTCTTTTGCTCCTCCAAGAGGCTTAATTGAAGATGGAAGTCAGGCCCAGTGGTTTGTAGATGGACATGCTGCATTTGAGGCAATTGCTTCTTCAATTAAGGATGCAAAATCAGAGATATTTATTTGTGGGTGGTGGTTGTGCCCAGAACTGTATCTACAACGTCCTTTTCACACTCACGCTTCATCAAGGCTTGATAATTTGCTGGAAGCAAAAGCCAAGCAAGGGGTCCAGATTTACATTCTTCTCTACAAGGAGGTAGCAATTGCTTTGAAAATCAACAGTTTTTATAGCAAGAGAAAGCTTCTTAGTATTCATGAGAACGTGAGGGTATTACGCTATCCTGACCACTTTTCCAGTGGTGTTTACCTGTGGTCACACCATGAAAAACTTGTCATTATTGACCACCATATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGATACACCTGAACATAAAGTTGGGGATTTCCCACCTATGATCTGGCCTGGAAAGGACTATTATAATCCAAGGGAATCTGAACCAAATTCATGGGAAGATACGATGAAAGATGAATTGGAACGTGGAAAATACCCTCGTATGCCTTGGCATGATGTTCATTGTGCACTTTGGGGGCCACCTTGTCGAGACATAGCTAGGCACTTTGTTCAAAGATGGAACTATGCAAAGAGGAACAAAGCTCCAAATGAGCAAGCAATACCATTGCTTATGCCTCAGCATCATATGGTTATTCCACATTACTTGGGAAGAAGCGGAGAGGCGCAAACTGAAATCAAGAATACTGATAATTATAGAGTCCTCAAGAGGGTAGATTCATTTTCCTCATCAGCAGAAGATATTCCTTTGCTTTTGCCTCAGGAGTCTGGTGGTCTAAATACTTCTGAAGGGGACCCAAAATATGGGTTAAGTTTATTTTCATATCACGGTGACCAGCCTACTAGTCGGGTCAGCAGTAGTCTTGCTTTCTCCTTATGGAAGCCCAAAATTGAACCAGTTGGCCCTGATACACCGATGAAGGGTTTTGTAGACAATCTTGACAGTGTGGGTCATCATAGGAAAATGTCTCTGGATAGAGTGTCTCATGTTGAAGTGCAGAGTACAGATCCAGAATGGTGGATGACACCAGAACATGGGGATCATGGAGGTTTTGCAGGCAAATCAGGACAAGTTGGTCCTCATGTTTCCTGCCGTTGTCAGGTTATTAGGAGTGTCACTCAATGGTCTGCTGGAACAAGCCAACCCGAAGAGAGCATCCACAATGCCTATTGCTCTCTAATTGAGAAGGCAGAGTACTTCATCTACATTGAGAATCAATTTTTTATCTCGGGCCTTTCACGGGATGAGATAATAAAAAACCGTGTGTTAGAAGCTTTACATCGACGGATTAGGCGAGCTTACAATGATGGAAAAACTTTTAGGGTTATAATTGTCATACCCCTCCTTCCTGGCTTCCAGGGGGGCCTGGATGACAGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTATAGAACTGTCTGCCGTGGACCGAATTCTATACTACATAATCTGTATGAACTTCTTGGTTCAAGGATGCATGATTATATCTCTTTCTTCGGCCTCAGGGCATTTGGTAGACTCTTTGAAAATGGTCCTGTGGCAACCAGCCAGGTCTATGTTCACAGTAAAATCATGATTGTTGATGATTGCACATGTTTGATTGGATCTGCTAATATAAATGACAGGAGTTTGCTTGGCTCTAGAGATTCTGAGATTGGTGTAGTTATTGAAGACAGAGAACTGATTGGTTCTCATATGGATGGAAAGCCTTGGAAGGCAGGAAAATTCTCCCTGACTCTCCGATTGTCATTATGGTCCGAGCATTTAGGTCTCGGAGCCGGAGAGGTCAATCAAATAATGGACCCAGTTGTTGAGTCTACTTACAGGGATATTTGGATGGCAACAGCAAAGACAAATACTACAATATACCAGGATGTCTTTTCTTGTGTGCCTAATGATTTGATACACAACAGATATGCTTTCAGGCAAAGCGTAGCTTTTTGGAAAGATAAAATCGGTCACACTACCATTGATTTAGGAATAGCCCCGAAAAAAGTAGAATCTCATCATAACGGAGTTACCGAGAAAACTGATCCCTTGGATAGATTAACGTCAGTGAGAGGTCATCTTGTCCATTTTCCCCTGGAGTTCATGAGCTTGGAAAATCTAAAACCTGCTTTTAATGAAGGCGAGTACTACGCTGCTCAAGTTTTCCATTGA 3306 0.4383 MATEQLMLGRGGGPGYVQMQSEASTSAFRQAAEPGRIFDELPEATIVSVSRPDAADISPMLLTYTVLVHYKQFKWQLVKKASQVVYLHFMLKKRAFFEEIHEKQEQVKEWLQNLGMGDLSPVVQDDDDDDDEADDEAIPLHHHHHHHDESAKDRDVPSSAALPILRPALGRQHMVAGRAKTAMQGYLNHFLGNTSIVNSREVCKFLEVSMLSFLPEYGSKLKEEYVRVMHLPQIPKNDDSRKCCMSHCFSCCNDKWQKILLTVQPLDIICFDVLPGSEGNGVGHLSLAQEMKERNPLRHSFKVTCGNRSIRIRAKSSAKVKDWVAAINDAGLKPPEGWCNPHRYGSFAPPRGLIEDGSQAQWFVDGHAAFEAIASSIKDAKSEIFICGWWLCPELYLQRPFHTHASSRLDNLLEAKAKQGVQIYILLYKEVAIALKINSFYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIIDHHICFIGGLDLCFGRYDTPEHKVGDFPPMIWPGKDYYNPRESEPNSWEDTMKDELERGKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGRSGEAQTEIKNTDNYRVLKRVDSFSSSAEDIPLLLPQESGGLNTSEGDPKYGLSLFSYHGDQPTSRVSSSLAFSLWKPKIEPVGPDTPMKGFVDNLDSVGHHRKMSLDRVSHVEVQSTDPEWWMTPEHGDHGGFAGKSGQVGPHVSCRCQVIRSVTQWSAGTSQPEESIHNAYCSLIEKAEYFIYIENQFFISGLSRDEIIKNRVLEALHRRIRRAYNDGKTFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTVCRGPNSILHNLYELLGSRMHDYISFFGLRAFGRLFENGPVATSQVYVHSKIMIVDDCTCLIGSANINDRSLLGSRDSEIGVVIEDRELIGSHMDGKPWKAGKFSLTLRLSLWSEHLGLGAGEVNQIMDPVVESTYRDIWMATAKTNTTIYQDVFSCVPNDLIHNRYAFRQSVAFWKDKIGHTTIDLGIAPKKVESHHNGVTEKTDPLDRLTSVRGHLVHFPLEFMSLENLKPAFNEGEYYAAQVFH* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2650 1101 Pfam PLD-like domain 771 944 IPR025202 -
Dod05g2650 1101 Gene3D Endonuclease Chain A 354 590 - -
Dod05g2650 1101 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 898 925 IPR001736 GO:0003824
Dod05g2650 1101 CDD PLDc_vPLD1_2_yPLD_like_2 758 942 - -
Dod05g2650 1101 Gene3D Endonuclease Chain A 731 957 - -
Dod05g2650 1101 SUPERFAMILY Phospholipase D/nuclease 738 943 - -
Dod05g2650 1101 Pfam Phospholipase D Active site motif 467 494 IPR001736 GO:0003824
Dod05g2650 1101 PANTHER PHOSPHOLIPASE D 27 1098 IPR015679 -
Dod05g2650 1101 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 467 494 IPR001736 GO:0003824
Dod05g2650 1101 PANTHER PHOSPHOLIPASE 27 1098 - -
Dod05g2650 1101 SUPERFAMILY PH domain-like 279 331 - -
Dod05g2650 1101 SUPERFAMILY Phospholipase D/nuclease 322 587 - -
Dod05g2650 1101 CDD PLDc_vPLD1_2_yPLD_like_1 360 504 - -
Dod05g2650 1101 PIRSF PLD_euk 21 614 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod05g2650 1101 PIRSF PLD_euk 679 1101 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dod05g2650 1101 SMART pld_4 467 494 IPR001736 GO:0003824
Dod05g2650 1101 SMART pld_4 898 925 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2650 Dod-Chr5 52712993 52722420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2650 1 982 Phospholipase D Gene Family (Wang group) AT3G16785 68.385 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2650 K01115 - gmx:100780514 1815.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2650 05 52712993 52722420 Dod05g2650 05 52712993 52722420 ECH