Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2645 ATGGGGAGAATGGGACAAGAATCAGATTCCAAGACCCAGTTGGTATTAGGGATTTGCTCCATTGCCACACGTCCTGTGCTGTGTGCTCACAGACTTCCCTCTAACTCAGCCAAGCCATCTTTCATTGACTGGTATTGCATTCTTGGGGTGGAAGAAAATGCAGGGATAAATTCCATTCGCAAGCGATACCATAAACTGGCACTGCAACTTCATCCAGATAAGAACAAACACCACAAGGCTGAAATTGCTTTCAAGCTTGTTTCTGAGGCATATACATGTCTATCCAATGCTGGAAAGAGAAAAGCCTTTGACTTGGAGAGATTCAAGAACTCATGCTTTGAGTGCAAAAGAATCCAGCATACAGCCGGCAATGCCGCTGGCAATGGCAATTCCAGTGGGTCGGGTTTCAAGGCATGGAACATTATCAGTGTGCCAAGATCTTTTAAACTGTGGAGGAATATAAGGGACATGAGGGAGAGATTCAAGGAGGAGGCAAAGGTGATAGAGAGTTGTCTGAGAGCAAATTCAATGCCAAGGAAGGAACCTTCCCTGTACAATCCAGTTGGATACCTACAAAGAAGCAAGTCGCTGCACGGATTTGATAAAGAAACCCCAGTTTTCAATCCGTCGGATTACTTGTACCAAGGCTACCCTCATTTGAGGACCAATGTTTACAAGAATTCTTCAACATTTTGGTACCTGCAGACAGAAAGTATGCTGCACAATGGAAATGGAAGAGCGCAGCATACCTCTCCTGTTTTTGAGGTCCGGTCTAGTAGCATGTTCACAAGGAAATTTGCTTTCGTCCCATCACAATGTTAG 822 0.4465 MGRMGQESDSKTQLVLGICSIATRPVLCAHRLPSNSAKPSFIDWYCILGVEENAGINSIRKRYHKLALQLHPDKNKHHKAEIAFKLVSEAYTCLSNAGKRKAFDLERFKNSCFECKRIQHTAGNAAGNGNSSGSGFKAWNIISVPRSFKLWRNIRDMRERFKEEAKVIESCLRANSMPRKEPSLYNPVGYLQRSKSLHGFDKETPVFNPSDYLYQGYPHLRTNVYKNSSTFWYLQTESMLHNGNGRAQHTSPVFEVRSSSMFTRKFAFVPSQC* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2645 273 ProSiteProfiles dnaJ domain profile. 43 107 IPR001623 -
Dod05g2645 273 SUPERFAMILY Chaperone J-domain 38 106 IPR036869 -
Dod05g2645 273 Pfam DnaJ domain 43 104 IPR001623 -
Dod05g2645 273 SMART dnaj_3 42 99 IPR001623 -
Dod05g2645 273 PRINTS DnaJ domain signature 45 63 IPR001623 -
Dod05g2645 273 PRINTS DnaJ domain signature 63 78 IPR001623 -
Dod05g2645 273 PRINTS DnaJ domain signature 79 99 IPR001623 -
Dod05g2645 273 PANTHER BNAC03G44070D PROTEIN 6 260 - -
Dod05g2645 273 CDD DnaJ 43 96 IPR001623 -
Dod05g2645 273 Gene3D DnaJ domain 42 166 IPR036869 -
Dod05g2645 273 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2645 Dod-Chr5 52682344 52683761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2645 43 104 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.909 1.15e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2645 - - gmx:100801809 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2645 05 52682344 52683761 Dod05g2645 05 52682344 52683761 ECH
Dod05g2645 05 52682344 52683761 Dod03g1281 03 16290731 16292375 PCT