Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g2632 ATGGCATCGCACCACCTCAGCTGCTTCATCAGCATCGCCGTCACATCCATCCTGTTGTTCCTCTCAACGGCGCCGTTTTCGGATGCGCAATCATCGTCATCCTGCAATGGCATCTTCGTGTCGTACGCATACACGAGCGGAGCGAGGCTGCCGCCGAATGTCTCCGACGCGGCGAAGCAGCCGTACAGGTTCGAGTCGACTCTGACAGTGCTCAACAACGGCCTCGACGACCTCAAGTCATGGAAGGTCTTCGTCGGGTTCCAGCACGACGAGTTCCTCGTCTCCGCCTCCAACGCCGTCCTCGCCGACGGCACCACACTCCCCGCCGCCGTAGGTAACGGCACTGTCTTCGCCGGATACCCCATGACCGACCTCATGACGGCGGTTGAGACCGCCGGCGACCTCACTCAGATGCAGGTCCAGATCGAGCTCGTTGGGACTGTCTTCGGTGTGGCCCCACCAAGTGTTCCTCTTCCTTCCTCTATCAACCTCGCCAACGATGGATTCATCTGTAAAAAACCCTCTGGTCAAGGGAAGAATGTGAGTAATGTGTGTTGCACGAAGGATCCAAAGTTCAAAACGAACATTACCACAGATGACAAGTTCTTGCCCCGTCAGAATGGTGATCTTACAATTATGTATGATGTGATCAGAACTTATGACTCCAATTACTGGGCTGAGGTTAGCATTGCTAACCATAACCCTCTTGGCCGTCTTGACAACTGGAAGTTGAGCTGGGACTGGATGAATGATGAGTTCATATATTCCATGAAGGGTGCTTACCCTTTTGTTGTAGATTCTTCTGATTGTGTCTTTGGTAAGCAAGGGACTTTCTACAATGATCTTGACTTTTCCAATGTCTTGAACTGTGAAAGAAGGCCAACCATCATTGATCTCCCTCCTACTAAGTACAATGACACCGATCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGGACTATATTGCCACCATCAATGGACCCTAGCAGGTCGGTTTCCAGGTTCCAGATGCAGGTTTTTAAGATGCCACCTGCACTTAATCGATCCCAGCTCTCACCGCCCCAAAACTGGAAGATAAATGGCACTCTGAACCCTGATTACAAGTGTGGACCTCCTGTCCGGGTGAGCCCTAGTGAGAATCCAGATCCATCAGGCTTGCCATCGAACAAAACCGTGATGGCGAGTTGGCAGGTTGTGTGCAACATAACAAAGGCCAAGGGAGCACCTAGCAAATGCTGTGTCTCATTTTCAGCATACTACAATGATTCAGTTATTCCTTGCAAAACTTGTGCTTGTGGATGCCCCAGTAACACTGCAAGAACATGTAGTACTACTGCACCAGCTATGTTCCTTCCACCGGAGGCACTTCTTGTTCCTTATGATAACCGAAGTGCCAAGGCTTATGCTTGGGCTGATCTGAAACATCTGCCAAAGCCAAATCCAATGCCGTGTAGTGACAACTGTGGTGTGAGCATCAACTGGCACGTATATACAGACTACACTAAAGGGTGGAGTGCGAGGGTCACACTTTTTAACTGGGGTGACACTAGTTTTGCAGACTGGTTTGCTGCAGTGCAAATGGACAAAGCAGCTGAAGGTTTTGAGAAAATGTATTCATTCAATGCAAGCACCCTAAACGGGGTCAATAATACCATATTCATGGAAGGTTTGGAAGGATTGAACTTCCTTGTTGCAGAAACAAATGGAGCTGACCCTCAGAAAGATCCAAGGGTGCCTGGTAAACAGCAGTCAGTAATCTCATTCACAAAGAAAACTACTCCTGGCATAAATGTTGCTCGTGGAGATGGGTTCCCTACCAAAGTCTTCTTCAATGGGGAGGAATGCTCTCTTCCTTCAGTGTATCCAGCTAGTAATGGTTTCAGGAAGGTTTTTTCCTGGAAAACTTCGATGCTTCTAACAGTGTTGCTGATCATCTTGATCCGGTAA 1947 0.4895 MASHHLSCFISIAVTSILLFLSTAPFSDAQSSSSCNGIFVSYAYTSGARLPPNVSDAAKQPYRFESTLTVLNNGLDDLKSWKVFVGFQHDEFLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLMTAVETAGDLTQMQVQIELVGTVFGVAPPSVPLPSSINLANDGFICKKPSGQGKNVSNVCCTKDPKFKTNITTDDKFLPRQNGDLTIMYDVIRTYDSNYWAEVSIANHNPLGRLDNWKLSWDWMNDEFIYSMKGAYPFVVDSSDCVFGKQGTFYNDLDFSNVLNCERRPTIIDLPPTKYNDTDLGKIPFCCRNGTILPPSMDPSRSVSRFQMQVFKMPPALNRSQLSPPQNWKINGTLNPDYKCGPPVRVSPSENPDPSGLPSNKTVMASWQVVCNITKAKGAPSKCCVSFSAYYNDSVIPCKTCACGCPSNTARTCSTTAPAMFLPPEALLVPYDNRSAKAYAWADLKHLPKPNPMPCSDNCGVSINWHVYTDYTKGWSARVTLFNWGDTSFADWFAAVQMDKAAEGFEKMYSFNASTLNGVNNTIFMEGLEGLNFLVAETNGADPQKDPRVPGKQQSVISFTKKTTPGINVARGDGFPTKVFFNGEECSLPSVYPASNGFRKVFSWKTSMLLTVLLIILIR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g2632 648 Pfam COBRA-like protein 224 403 IPR006918 GO:0010215|GO:0031225
Dod05g2632 648 PANTHER COBRA-LIKE PROTEIN 7 4 647 - -
Dod05g2632 648 PANTHER COBRA-LIKE PROTEIN 7 4 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g2632 Dod-Chr5 52547500 52551136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g2632 35 632 COBRA Gene Family AT4G16120 69.934 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g2632 - - gmx:100803929 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2632 05 52547500 52551136 Dod05g2632 05 52547500 52551136 ECH
Dod05g2632 05 52547500 52551136 Dod03g1268 03 16036356 16040413 PCT